Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00570 ATGGGGGCTCGTTGCTCTAGATTCTCTTTCTGCTGGATCCACTCTCACCTCAATCCTTCTGTTCTTGAATCCTCTGACCAAGAAAATGGTGGAAAGAGTGAAAGAAACTTGTGGCCTAGTTTTAGTGAGTACAGTTTGGAAGAATTGAAGGCTGCAACAAATGGATTCTCCTCAGAAAACATAGTTTCTGAGCATGGTGAGAAAGCTCCAAATGTTGTTTACAAAGGGAAACTTGAGAATGGACTATTGATTGCTATCAAACGTTTCAACAAGTTCGCTTGGCCGGATTCTCGACAATTCATTGAAGAATCTAAACAAGTGGGGAGCCTTAGAAGTGAACGTTTGGCGAATTTGATTGGTTGTTGCTATGAAGGGGATGAGAGGCTGCTAGTGGCAGAGTTTATGCCACATGAAACTTTGGCAAAGCATCTCTTTCATTGGGAGGCACAGCCCATGAAATGGGCAATGAGGTTGAGGGTGGCCTACTATTTAGCTCAAGCTCTTGAGTATTGTACTAGTAAAGGAAGGGGTTTGTATCATGATCTCAATGCCTACAGGATCTTGTTTGATCAGGACGGTAATCCCAGGTTATCTTGCTTTGGACTTATGAAGAACAGCAGAGATGGAAAGAGTTACAGTACAAACTTGGCTTTCACTCCTCCTGAGTACTTAAGGACAGGTAGAGTAACAGCAGAGAGTGTGGTTTACAGTTTTGGAACTCTATTGCTTGATCTCTTGAGTGGTAAACATATTCCCCCAAGCCATGCACTTGACCTGATACGCGGCAAAAACTATTTGATGTTGATGGATTCTGCATTAGAGGGTCACTTTTCAAAGGATGATGGAACTGAGTTAGTTCGTTTGGCTTCTCGTTGCTTACAATATGAAGCTCGCGAGAGGCCAAATGCTAAGTCTCTTGTTGAAACACTTATGTCACTTCAGAAAGAAACAGAGGTTCCCTCACATGTTCTAATGGGTCTGAAGCAAGAAACAGAATCATCAACAAAGCCATTGTCATTGACACCATTTGGTGAATCATGTTTGAGATTGGATCTTACTGCCATACATGCAATATTAGAGAAGACTGGTTACAAGGATGATGAAGGAATTGCCAATGAGCTTTCCTTTCAATTGTGGACTAGTCAAATGCAAGAGACCTTGAATTTGAAGAAACATGGAGATACCGCTTTTCGAGCTAAGGACTTTGTCACTGCCATTGACTGCTACACAAAATTCATAGATGGAGGAACCATGGTTTCACCTACAGTATATGCAAGGCGTTGCTTGTCATATTTGATGAATGACATGCCACAGGAAGCTCTAGGGGATGCCATGCAAGCTCAAGTAGTATCTCCCGAGTGGCCTACTGCTTTTTATCTTCAAGCAACATGTCTTTTCAGCCTTGGAATGGAAAATGATGCACAAGAGACTCTCAAAGATGGGACTAATATTGAAGCTAAAAAGCATAAAAACTGA 1476 0.4194 MGARCSRFSFCWIHSHLNPSVLESSDQENGGKSERNLWPSFSEYSLEELKAATNGFSSENIVSEHGEKAPNVVYKGKLENGLLIAIKRFNKFAWPDSRQFIEESKQVGSLRSERLANLIGCCYEGDERLLVAEFMPHETLAKHLFHWEAQPMKWAMRLRVAYYLAQALEYCTSKGRGLYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTAESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNYLMLMDSALEGHFSKDDGTELVRLASRCLQYEARERPNAKSLVETLMSLQKETEVPSHVLMGLKQETESSTKPLSLTPFGESCLRLDLTAIHAILEKTGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKDFVTAIDCYTKFIDGGTMVSPTVYARRCLSYLMNDMPQEALGDAMQAQVVSPEWPTAFYLQATCLFSLGMENDAQETLKDGTNIEAKKHKN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00570 491 FunFam probable serine/threonine-protein kinase At4g35230 384 491 - -
Trre7g00570 491 Gene3D Tetratricopeptide repeat domain 383 491 IPR011990 GO:0005515
Trre7g00570 491 SUPERFAMILY Protein kinase-like (PK-like) 34 320 IPR011009 -
Trre7g00570 491 SUPERFAMILY TPR-like 387 484 IPR011990 GO:0005515
Trre7g00570 491 Gene3D Phosphorylase Kinase; domain 1 31 134 - -
Trre7g00570 491 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Trre7g00570 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 20 490 IPR045845 GO:0004672|GO:0009742
Trre7g00570 491 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00570 491 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
Trre7g00570 491 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Trre7g00570 491 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00570 Trre-Chr7 3606398 3609946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00570 18 310 Glycoside Hydrolase AT3G07070 33.333 3.91e-42 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Trre7g00570 PK_Tyr_Ser-Thr 8.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00570 - - gmx:100814477 926.391