Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00564 ATGATGATGATGCATATGAAGAAGCAAATGAAAATGCACATGTCTCTCTATTGGGGAAAAGATGCTATAGTACTCTTCTCTGGGTGGCCTAACCAAAGTGTTAGCATGTATTTCTTAGCTATTTTGTTTGTGTTTTTCCTTGGAATGGTTATTGAGATTTTGCCTAACAAACCTACCATCAAGCAAGGGACAAATCATATCAAGGGAGGGTTGATTCAAGCTACCATATTCTTCTTTCGTATTAGTTTCCATTACTTGGTGATGCTTGCTGTTATGTCTTTCAATATAGGAATTTTCATTGCTGCTGTTGCTGGTCATACCTTGGGATTCTTAGTCAAGCCTCATATTTTTGTTGCCAACAAAAAACAAAATCCCAAGTCCTCCTTGGCTATTGATGAAATCTAG 405 0.3728 MMMMHMKKQMKMHMSLYWGKDAIVLFSGWPNQSVSMYFLAILFVFFLGMVIEILPNKPTIKQGTNHIKGGLIQATIFFFRISFHYLVMLAVMSFNIGIFIAAVAGHTLGFLVKPHIFVANKKQNPKSSLAIDEI 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00564 134 Pfam Ctr copper transporter family 62 112 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trre7g00564 134 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 3 117 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00564 Trre-Chr7 3549946 3550350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00564 15 128 Inorganic Solute Cotransporters AT5G59030 41.880 6.37e-28 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00564 K14686 - gmx:100808693 162.925