Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00560 ATGGCGAACCTGAAAGACCTTGTTAATGAACTCATCATTCCCGATCTCCGAGAAAATGCTCTCTATGTGCTCTCCAAGAGAAGAGATCTGTATCACGAAATTGCCCCTTTATTGTGGAATACTGCTTGTGTTGTTACCGTATTTTTACAGGAAATAATATCAATATATCCGGCTGTTTCATCATTGGAACTTACTTCTGCACAGTCAATTCGAGTTGTCAATGTTCTTGCACTACTTCAGTGTTTGGCATCTCACCCTGAAACAAGGATGCCGTTCCTCAATGCTAACATACCTCAATATTTCTATCCATTTCTTCAAACGACTAGCAAGTTACCACAATTTGAGTTCTTGAGGATTGCTAGTCTTGGAGTCATTTGTGCCTTGGCGAAGGCTAACACCGAAGAAACCATAAATTTTCTTCTTTCAAGCGAGGTTGCAATGTTTGTAGTACAAAAAGTTTTGGCAAATGACAACGGTTTAGAGTATATATGTTCTACAGCAGAGCGTTTTTTTGCTGTAGCAAAAGTGTTGGAAATGGTCTTAGGAAGTCTTGAGGAGCAACCTTCCCCTCGACTTTTAAAATATGTAATTTCATCTTATTCTCGTTTATCTCATAATCACAGGGCTGGCATTGCATTGGTGAGGTGCATTCCAAACACTCTCATGGATGCGACTTTCATTAATTACATCCGTGAAGACCCAGAAACACTGAAACTGATGGACGTTTTGCATGGAAATATTAGAAGCAATCAAGTTTCTTCAGAACAAGGTGGCAATGGAGTCGAAGATACTGGAGGTCGTTAG 804 0.3993 MANLKDLVNELIIPDLRENALYVLSKRRDLYHEIAPLLWNTACVVTVFLQEIISIYPAVSSLELTSAQSIRVVNVLALLQCLASHPETRMPFLNANIPQYFYPFLQTTSKLPQFEFLRIASLGVICALAKANTEETINFLLSSEVAMFVVQKVLANDNGLEYICSTAERFFAVAKVLEMVLGSLEEQPSPRLLKYVISSYSRLSHNHRAGIALVRCIPNTLMDATFINYIREDPETLKLMDVLHGNIRSNQVSSEQGGNGVEDTGGR 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00560 267 SUPERFAMILY ARM repeat 17 158 IPR016024 -
Trre7g00560 267 PANTHER UNCHARACTERIZED 4 251 IPR007216 GO:0006402|GO:0030014
Trre7g00560 267 Pfam Cell differentiation family, Rcd1-like 7 145 - -
Trre7g00560 267 Gene3D - 2 252 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00560 Trre-Chr7 3516540 3527114 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Trre7g00560 Rcd1 1.1e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00560 K12606 - mof:131164386 276.944