Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00559 ATGGCGAACCTGAAAGACCTTGTTAATGAACTCATCATTCCCGATCTCCGAGAAAATGCTCTCTATGTGCTCTCCAAGAGAAGAGATCTGTATCACGAAATTGCCCCTTTATTGTGGAATACTGCTTGTGTTGTTACCGTATTTTTACAGGAAATAATATCAATATATCCGGCTGTTTCATCATTGGAACTTACTTCTGCACAGTCAATTCGAGTTGTCAATGTTCTTGCACTACTTCAGTGTTTGGCATCTCACCCTGAAACAAGGATGCCGTTCCTCAATGCTAACATACCTCAATATTTCTATCCATTTCTTCAAACGACTAGCAAGTTACCACAATTTGAGTTCTTGAGGATTGCTAGTCTTGGAGTCATTTGTGCCTTGGCGAAGGCTAACACCGAAGAAACCATAAATTTTCTTCTTTCAAGCGAGGTAGTACCGTTATGTTTGAAGAGTATAGAAAGCGGAAAAATATTTGCAAAAACCGTTGCAATGTTTGTAGTACAAAAAGTTTTGGCAAATGACAACGGTTTAGAGTATATATGTTCTACAGCAGAGCGTTTTTTTGCTGTAGCAAAAGTGTTGGAAATGGTCTTAGGAAGTCTTGAGGAGCAACCTTCCCCTCGACTTTTAAAATATGTAATTTCATCTTATTCTCGTTTATCTCATAATCACAGGGCTGGCATTGCATTGGTGAGGTGCATTCCAAACACTCTCATGGATGCGACTTTCATTAATTACATCCGTGAAGACCCAGAAACACTGAAACTGATGGACGTTTTGCATGGAAATATTAGAAGCAATCAAGTTTCTTCAGAACAAGGTGGCAATGGAGTCGAAGATACTGGAGGTCGTTAG 858 0.3951 MANLKDLVNELIIPDLRENALYVLSKRRDLYHEIAPLLWNTACVVTVFLQEIISIYPAVSSLELTSAQSIRVVNVLALLQCLASHPETRMPFLNANIPQYFYPFLQTTSKLPQFEFLRIASLGVICALAKANTEETINFLLSSEVVPLCLKSIESGKIFAKTVAMFVVQKVLANDNGLEYICSTAERFFAVAKVLEMVLGSLEEQPSPRLLKYVISSYSRLSHNHRAGIALVRCIPNTLMDATFINYIREDPETLKLMDVLHGNIRSNQVSSEQGGNGVEDTGGR 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00559 285 SUPERFAMILY ARM repeat 54 214 IPR016024 -
Trre7g00559 285 Pfam Cell differentiation family, Rcd1-like 7 264 - -
Trre7g00559 285 PANTHER UNCHARACTERIZED 4 269 IPR007216 GO:0006402|GO:0030014
Trre7g00559 285 FunFam Cell differentiation family, Rcd1-like containing protein 2 267 - -
Trre7g00559 285 Gene3D - 2 270 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00559 Trre-Chr7 3516540 3527114 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Trre7g00559 Rcd1 9.1e-95 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00559 K12606 - mof:131164386 308.145