Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00556 ATGGCCAAAGTTGAAGGAGAAGTTCAACTGTTAGGTGTAGGAGGAAGCCCATTTGCTAGAAGAGTGCAAATTGCTCTAAAATTGAAGGGCATTGAATACACTTACATTGAAGAAAATTTAAGGAACAAAAGTGATCTTCTTCTTAAGTACAACCCTATTCACAAGAAGGTGCCTGTTTTAGTTCACAATGGAAAACCCTTAGTTGAGTCCCTTGTGATCCTTGAATACATTGATGAAACATGGGAGAATTATCCAATTTTTCCTCGACAACCTTATGAGAAAGCCTTGGCTCGATTTTGGTCGAGGTTCATCGATGATAAGATTCTGCCAGCAATATCAAAGGCTGCATGGACAGTGAACAAAGAGGAACGTGAGAAAGGAACTGAAGAATCATTGCAAGCTCTACAATTTCTTGAGAATGAACTCAAGCACAAATTCTTTGGTGGAGAAAATATTGGCATTGTGGACATTGCTGCTTCTTACTTAGCTTTCTGGCTCCCTGTGCTTGAAGAAGCTGTAGAATTGAAGTTGCTTACCAGTGACAAATTTCCAAAGCTCTATAAATGGAGTCAAGAATTCATCAATCATCCTATTGTGAAAGAGAATCTTCCCCCTAAACAAGGACTCTTAGGATTTTTCAAATCTCGGTATGCGGCAATTATTGCTGCTTCGAAATAA 678 0.3894 MAKVEGEVQLLGVGGSPFARRVQIALKLKGIEYTYIEENLRNKSDLLLKYNPIHKKVPVLVHNGKPLVESLVILEYIDETWENYPIFPRQPYEKALARFWSRFIDDKILPAISKAAWTVNKEEREKGTEESLQALQFLENELKHKFFGGENIGIVDIAASYLAFWLPVLEEAVELKLLTSDKFPKLYKWSQEFINHPIVKENLPPKQGLLGFFKSRYAAIIAASK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00556 225 CDD GST_N_Tau 8 81 - -
Trre7g00556 225 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Trre7g00556 225 Gene3D Glutaredoxin 1 89 - -
Trre7g00556 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 206 IPR045073 -
Trre7g00556 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Trre7g00556 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 217 IPR010987 -
Trre7g00556 225 SFLD Main (cytGST) 5 223 - -
Trre7g00556 225 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Trre7g00556 225 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Trre7g00556 225 SFLD Main.3: Omega- and Tau-like 5 223 IPR045073 -
Trre7g00556 225 Gene3D - 90 224 - -
Trre7g00556 225 FunFam Tau class glutathione S-transferase 1 89 - -
Trre7g00556 225 FunFam Tau class glutathione S-transferase 87 223 - -
Trre7g00556 225 Pfam Glutathione S-transferase, C-terminal domain 103 197 IPR004046 -
Trre7g00556 225 SUPERFAMILY GST C-terminal domain-like 79 217 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00556 Trre-Chr7 3489109 3490096 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00556 5 222 Glutathione S-transferase Gene Family AT3G09270 49.774 3.94e-79 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00556 K00799 - gmx:100819805 359.377