Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00555 ATGGCAGCTACAAATCAAGAAGAAGAAGTGAAACTATTAGGAAAATGGCCAAGTCCATTTAGCAACAGAATAGATCTTGCTTTAAAACTCAAAGGTGTTCCATACAAATACTCAGAAGAAAATCTAGCTAATAAAAGTGATGATCTTCTTAAATATAACCCTGTTTATAAGAAGGTACCTGTTCTTGTTCATAATGGAAATCCAATAGCTGAGTCTCTTGTCATTCTTGAATACATAGATGATACATGGACGAATAATTCTTTTTTGTCTCAAGATCCTTATGAGAGAGCTTTGGCTCGGTTTTGGTCTAAGACTCTTGATGACAAGATTTTGCCTGCAATATGGGATGCATGCTGGAGCGATGAAAAAGGTCGCGAGAAAGCTGTGGAGGAAGCCTTAGAAGCTCTAAACATACTAGAGAATGAAATCAAAGACAAGAAATTCTTTGGTGGAGAAACCATAGGACTTGTTGATATTACTGCAAATTTCATTGGTTATTGGGTTGAAATATTACAAGAAATTGCAGGGTTGGAGTTACTTACCGTCGAAAAGTTCCCAAAGGTATTTAAATGGAGTCGAGAATTTATCAATCACCCTGTTATCAAGGAAGGTTTGCCTCCTAGAGATGAATTATTTGCTTTTTTCAAAGCTTCTGCTTCAAAAAAGTAG 669 0.3617 MAATNQEEEVKLLGKWPSPFSNRIDLALKLKGVPYKYSEENLANKSDDLLKYNPVYKKVPVLVHNGNPIAESLVILEYIDDTWTNNSFLSQDPYERALARFWSKTLDDKILPAIWDACWSDEKGREKAVEEALEALNILENEIKDKKFFGGETIGLVDITANFIGYWVEILQEIAGLELLTVEKFPKVFKWSREFINHPVIKEGLPPRDELFAFFKASASKK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00555 222 SUPERFAMILY GST C-terminal domain-like 81 218 IPR036282 -
Trre7g00555 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 87 IPR004045 -
Trre7g00555 222 FunFam Tau class glutathione S-transferase 89 222 - -
Trre7g00555 222 Pfam Glutathione S-transferase, N-terminal domain 9 80 IPR004045 -
Trre7g00555 222 Pfam Glutathione S-transferase, C-terminal domain 102 199 IPR004046 -
Trre7g00555 222 CDD GST_C_Tau 93 217 IPR045074 GO:0004364|GO:0006749
Trre7g00555 222 Gene3D - 92 222 - -
Trre7g00555 222 SFLD Main.3: Omega- and Tau-like 6 220 IPR045073 -
Trre7g00555 222 Gene3D Glutaredoxin 3 90 - -
Trre7g00555 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 215 IPR010987 -
Trre7g00555 222 SUPERFAMILY Thioredoxin-like 10 110 IPR036249 -
Trre7g00555 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 211 IPR045073 -
Trre7g00555 222 SFLD Glutathione Transferase (cytosolic) 6 220 IPR040079 -
Trre7g00555 222 FunFam Glutathione S-transferase U10 3 89 - -
Trre7g00555 222 CDD GST_N_Tau 10 83 - -
Trre7g00555 222 Coils Coil 122 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00555 Trre-Chr7 3486187 3487934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00555 5 217 Glutathione S-transferase Gene Family AT3G09270 59.535 2.16e-92 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00555 K00799 - gmx:547582 379.022