Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00531 ATGGCGCAAGGAACGGGACGGAGTAGTAGAATTGTTGGAGATTATGTAGTTGGGAAGCAAATTGGAGCAGGTTCGTTTTCAGTTGTGTGGCATGCGAGACACAAAGTTCATGGAACCGAAGTTGCTATTAAAGAGATCGCTACTCTTAGACTTAATAAGAAGTTGCAAGAGAGTCTTATGTCTGAGATTTTCATCTTGAAGCGTATTAATCATCCTAATATTATCTCTTTACATGATATAATTCAGGCTCCTGGGAAGATACATCTTGTGTTGGAGTACTGTAAAGGGGGAGATCTTTCTTTGTACATTCAACGACATGGAAGGGTACCGGAGGCAACTGCCAAGCATTTTATGCTTCAGCTGGCTGCCGGTCTACAAGTTCTTCGGGACAATAACCTTATTCATCGAGATCTGAAACCACAGAATCTTCTTCTCTCCAGAAATGATGAGAAGGCAGTGCTGAAGATCGCTGACTTTGGATTTGCAAGATCTCTGCAACCGAGGGGCCTTGCAGAAACATTATGTGGTTCACCACTCTACATGGCTCCAGAAATCATGCAACTGCAGAAGTATGATGCTAAGGCAGATCTCTGGAGTGTTGGAGCTATCCTATATCAGTTTGTTACTGGGAAAACACCTTTTACTGGAAACAATCAAATACAGTTACTACAGAATATTATGAAATCAACAGAATTGCAGTTTCCATCTGATAACCAAAGTTTGAGTTCCGAGTGCAAAGATTTGTGTCAGAAATTACTACGCCGTAACCCAGTGGAACGTCTAACTTTTGAAGAATTCTTTAACCACCCATTCCTTAATCCAAAGCAAACGGAACAGGATGAACCATTAAGGAATAAAAGCTCTTCAAGGCTGGTAGGTGGGTTCTCTTCAACAGTGACTGACCCTTTGAGAAGAACCGAGGAAAATTATCAAGAGGATTGCTTACCTTTCATTCTAGATGATGATTCCAGTGGACCTGAAAGAAGTACATTGTTTTCAAAGAAGTCCTCAATTAAGTCTACCTTTGGATTTGATCTAAATAGAAAACTAGATAAAGCAGAGTCTACTTCTATTTCTAATAATGTAAATTGTGCTTCCAGATATAGTAGTGTAACACATAGACCTGAAAACACTTCTAAAAGATTAGACAACCATAAAATTTTAGGAAGAAATCTCACTAGTCCTCTAGGATCTCCAGAACAGTTATTTGCAAACCCATATCCAAAAGTTACAGATTCACTTGAGAATATTGATCAAGAATATGTTCTTGTGTCTGGCCCTCCTATGGATGTTTCATCTTCTTCAGTGAATGCTTCAAAGCCCAGCCATTCCTTATTTAGGTCAGGTAGTTTTCCCCAAGAGTCTTCTAATACAATCACTAGATTAAGTGCTCCAATGCAAATCGTTGGTGCATCTACCAATAGCATGTGCCAAATTGGAAGTTCAGGTAGTCAGGACTCTGCTCCTGGGACTTCACATGGATCAATGGATACAGGTGATGAACAGCCATCAACTAACTGCATGACAAGGGTAAAATCATTGCAACAGTATGCATCTGCCATCACAGAATTAGTTAATGAAAAGATTGAGGCAGGAAAGCAGCTAGAAGCATTTTCTATTCAGCTTGTAATTCTTGCCATTTGGAAGCAAGCACTGCACATATGCCATACACAGGCTGCCTCAGCTATGGAAGGAAGTCCAAGTCAAGAAGCTTCAAGATATAGAAGGAGCACCAGCAAGAAACATGGTAGTCCCGATTCGGAAGAATGTCTTGATGAAAACACCAAAGTGCCGAAGGATTTATTATCTCAAATTGAAAGTGATATTTTGAGGGAATTTGAGCATGCCGAAGAACTTGCTAAGACCATAGAGCCTGGAAATACAGAAATGCCAGATGCAATGGAGACGATATTTCAAGCCGCCCTTGCTTTTGGGAAACATGGGGGTGTAGAAGAGCTTATGGGTGATACAGAAAGTGCAGCTGCATTGTATTCAAAAGCTGTCCGTCTATTGGTTTTCCTTCTAGTGGAAGGACCATCTCTGATCCTCAACCCTCCATTTTCATTGACAAACTCAGACCGTTACAGGCTTCGGAATTACATTGATATTCTTAATAACAGACAAGGTTATTCAAGGTCTCAGAGAATGACACTTCTTAAGGGTGATGATAGTCAAGGCATCTTTAAGGAAAAGTTTTAG 2199 0.4038 MAQGTGRSSRIVGDYVVGKQIGAGSFSVVWHARHKVHGTEVAIKEIATLRLNKKLQESLMSEIFILKRINHPNIISLHDIIQAPGKIHLVLEYCKGGDLSLYIQRHGRVPEATAKHFMLQLAAGLQVLRDNNLIHRDLKPQNLLLSRNDEKAVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILYQFVTGKTPFTGNNQIQLLQNIMKSTELQFPSDNQSLSSECKDLCQKLLRRNPVERLTFEEFFNHPFLNPKQTEQDEPLRNKSSSRLVGGFSSTVTDPLRRTEENYQEDCLPFILDDDSSGPERSTLFSKKSSIKSTFGFDLNRKLDKAESTSISNNVNCASRYSSVTHRPENTSKRLDNHKILGRNLTSPLGSPEQLFANPYPKVTDSLENIDQEYVLVSGPPMDVSSSSVNASKPSHSLFRSGSFPQESSNTITRLSAPMQIVGASTNSMCQIGSSGSQDSAPGTSHGSMDTGDEQPSTNCMTRVKSLQQYASAITELVNEKIEAGKQLEAFSIQLVILAIWKQALHICHTQAASAMEGSPSQEASRYRRSTSKKHGSPDSEECLDENTKVPKDLLSQIESDILREFEHAEELAKTIEPGNTEMPDAMETIFQAALAFGKHGGVEELMGDTESAAALYSKAVRLLVFLLVEGPSLILNPPFSLTNSDRYRLRNYIDILNNRQGYSRSQRMTLLKGDDSQGIFKEKF 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00531 732 MobiDBLite consensus disorder prediction 274 295 - -
Trre7g00531 732 Pfam Protein kinase domain 15 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00531 732 MobiDBLite consensus disorder prediction 559 595 - -
Trre7g00531 732 SMART serkin_6 15 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00531 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Trre7g00531 732 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Trre7g00531 732 ProSiteProfiles Protein kinase domain profile. 15 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00531 732 Gene3D Transferase(Phosphotransferase) domain 1 6 318 - -
Trre7g00531 732 SUPERFAMILY Protein kinase-like (PK-like) 11 427 IPR011009 -
Trre7g00531 732 MobiDBLite consensus disorder prediction 475 505 - -
Trre7g00531 732 CDD STKc_ATG1_ULK_like 21 271 - -
Trre7g00531 732 FunFam Non-specific serine/threonine protein kinase 2 95 - -
Trre7g00531 732 FunFam Serine/threonine-protein kinase ATG1 7 313 - -
Trre7g00531 732 MobiDBLite consensus disorder prediction 574 595 - -
Trre7g00531 732 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 8 641 IPR045269 GO:0004674|GO:0006914
Trre7g00531 732 MobiDBLite consensus disorder prediction 431 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00531 Trre-Chr7 3306234 3314140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00531 1 272 CBL-interacting serine-threonine protein kinases AT2G30360 36.559 8.43e-54 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Trre7g00531 Pkinase 2.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00531 K08269 - gmx:100791596 1262.28