Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00512 ATGGGGTGTTTTACTATATTGAAGAGAAATAAGAAAAAGTCTGATCAGATTGCGTATGTAAAACGCGTAAGCCCTGGCGAGGATTCACCTAAAGTACTTCCTGAACCCCAAACTCATACTCGCTCACTCCAGTCTGCGCCTCCTAGTTTTAAGATAAGAGTGAAACCCATTCAACCTACTAATAAAGTCACTAACAATAGATCGACTAGAATACGAGCTTTGTCTGCTCCATCGGCTCTTGATGAAGCAGAACAAGATGCATTGGCCTCAATTGAGTATGAGGGACAAGAAGACTCAAAATACCGAACTGGATCATGGAAGGAGCAGCGAACTTCTAGTCCACAACCTTTACCGCTTCCATCTCCTAAGGGTGGCGGTACACTGAAGACTGTTGGAAGCTTTAAGTCGGGGGCAGCTAGTAGTCCCTTATATGCTTCTGGACCTTTGCCGCTTCCACCAACTGGGTCACTTCGAAACTTTTCATATGACGAACTTGCTGCTGCTTGCCTCAATTTCTCTTCAGATCGATACATGTCAGAATCTCTTTCATCCACCATCTATAAAGCTTCCTTTGGTGATGATACTTCAACTTCAAGTTCAAAGAAATTTGAAGCCACTGTCACACGCCTTCGCCCATCACCTCAGGGCTTGAAGGAATTCATAAATGAAGTTAATACTCTTGCATCTTTGGAGCATCCAAACCTCTGTAGGTTGCTAGGATTTCACGCACGTGATGGTTCAGAACATAGAATGCTGGTTTATGAAAGGCTATACCATGGAAGCTTGGACCGCTTATTGTATGGGAAATCTGATGGACCATCAATTGATTGGAGCACAAGAATGAAAATTGCAATATGTGCTGCACTAGGTCTTTCTTTCTTGCACGAAGAAGGGCCTTTTCAGGCAATGTATAATGAATTCTCAACAGCCAACATTCAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTCGGACATGTTCCCAAGGAAGAGATTTCAAGCAGTTCATCTGCCGTTGGAAACCTATCGATGGAGACACTGGAGAAAGGAATGCTTACACCAAAGAGCAATGTATGGAGTTTCGGAATTTTTCTTCTAGAGCTACTTACAGGAAGAAAGAATCTCGATAGCCGTCACCCCAAGGAAGAGAGAAATTTGGTGAAGTGGAGTAGGCCTTTCCTATCTGATGATCATCGCTTGTCAATGATCATGGATCCTCAACTCAAAGGTCGCTTTCCTTCTAAAGCGGCGAGTACAATAGCTAACATTGCACAAAGATGCCTCCAAATGGAGCCATCAGAACGACCAACCATGGGAACTGTTGTTGAGCATCTCAAAAAGATACAAGATTTGAAGCATTCTTCCAGATTTCCACTGCAAGAACCAGCACAAATGTCGAGATCACCAAGTCTTAATGGTATCATTCACCCTGCACCAAGGTCGAGTTTCTCTCCATCACCATCATCCAGAGCCCTGGTATCTGTTTCACCTCCAAGATGGTCAGGAGTGTCGATTCAACTTCCGCCTCGTGCTTTTTCTTCAACCCTCTATTTGGAAGAGCTTGATAGGCAAGAAAGCCGCAAGTTATCGTACTCGGCCTCAGCCTCAGCCTCTAGGAAGGCTAGTGTTGAAGGATTTTGA 1653 0.4398 MGCFTILKRNKKKSDQIAYVKRVSPGEDSPKVLPEPQTHTRSLQSAPPSFKIRVKPIQPTNKVTNNRSTRIRALSAPSALDEAEQDALASIEYEGQEDSKYRTGSWKEQRTSSPQPLPLPSPKGGGTLKTVGSFKSGAASSPLYASGPLPLPPTGSLRNFSYDELAAACLNFSSDRYMSESLSSTIYKASFGDDTSTSSSKKFEATVTRLRPSPQGLKEFINEVNTLASLEHPNLCRLLGFHARDGSEHRMLVYERLYHGSLDRLLYGKSDGPSIDWSTRMKIAICAALGLSFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHVPKEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLSDDHRLSMIMDPQLKGRFPSKAASTIANIAQRCLQMEPSERPTMGTVVEHLKKIQDLKHSSRFPLQEPAQMSRSPSLNGIIHPAPRSSFSPSPSSRALVSVSPPRWSGVSIQLPPRAFSSTLYLEELDRQESRKLSYSASASASRKASVEGF 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00512 550 Gene3D Transferase(Phosphotransferase) domain 1 257 469 - -
Trre7g00512 550 MobiDBLite consensus disorder prediction 15 48 - -
Trre7g00512 550 Pfam Protein tyrosine and serine/threonine kinase 197 449 IPR001245 GO:0004672|GO:0006468
Trre7g00512 550 MobiDBLite consensus disorder prediction 93 132 - -
Trre7g00512 550 MobiDBLite consensus disorder prediction 528 550 - -
Trre7g00512 550 Gene3D Phosphorylase Kinase; domain 1 156 255 - -
Trre7g00512 550 ProSiteProfiles Protein kinase domain profile. 172 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00512 550 PANTHER OS01G0588500 PROTEIN-RELATED 106 453 - -
Trre7g00512 550 SUPERFAMILY Protein kinase-like (PK-like) 151 459 IPR011009 -
Trre7g00512 550 MobiDBLite consensus disorder prediction 464 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00512 Trre-Chr7 3168759 3171418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00512 151 453 Receptor kinase-like Gene Family AT4G02010 38.065 2.56e-58 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Trre7g00512 PK_Tyr_Ser-Thr 3.5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00512 - - tpra:123923511 1007.67