Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00469 ATGGACTACATAACATTTATCCCTCTCATTTCCTTTCTATATGCATTCATTCATATCATAGCTTTTGGCCTAATTAGCAAAAACACAAAATGTCCTAATCTCCCACCAGGTCCTCCAAGTTATCCCTTAATAGGAAACTTATTGCAACTTGGTCCTTCAAAACTTCACCAATCACTTACTAAACTCTCCAAAACATATGGACCAATTATGTCACTTAAAATTGGCACTATTAACACTGTAGTAATTTCATCTCCAAAAATAGCCAAAGAAGCACTTCATAAAAATGACCAAGCCTTATCTAATAGATTGGTACCAGAATCTGTCCAAGCACTTTCACATGATAAATCTTCCATAATTTTCATGCCCATTTCACCAAAATGGAAGACTCTTAGAAAAATTTGTGCCACTAAGATATTCTCTTCTCAACAACTTGATTTTACTCAAGCACTTCGTTTAAAAAAATTGAAAGAACTAGTTGTTTACTTGCAAGAAAATTGTAGAAAAGGTAAAGCTATTGATATTGGTGAGGTTGCATTTACTATATCACTTAATTCAATATCAAGCACACTTTTCTCCATTGACTTGGCAAGTTTTACTTCTAGTTCTTCTCAAAACTTTAGAGATGTTATTTCATCCATGTTGATTGATGCTTCGAAGCCAAATATCGCAGACTATTATCCTGTTTTGCGTAAAATTGATCCGCAAGGAGCACAACGAAGGATGAAAAACTATTACCAAAAATTGATTACACTTTTTGAGTCTATCATTAAAGATAGAAGTAATCGAATGAAATATTCTAAGATGGAAGGAAGTGATGTGTTAGACTCATTTCTCGATATCATACAAAAAGAAAATCCTAAATTGACATTACATGAGGTGTTACATCTATTTCTGGACTTATTTGTGGCTGGAACAGACACAACATCAGCCACAGTTGAATGGGCAATGGCAGAGTTGCTACAAAACCCAAAGAAATTGAAGAAAGCAAGAAAGGAACTTCAACAAGTTATCAACAAAGATGAAGATCCAAAAGACTTAGATATCAATAAGCTCCCTTACCTACAAGCAGTTGTAAAAGAAACCCTAAGGTTGCACCCTTCAGCCCCGATATTAGTCCACAAATCGATTTCCGATGTGGATTTATGTGGCTTCAAAGTACCAAAAGATACACAAGTTCTTGTGAATGTGTGGAGCATGGGAAGAGACTCGAGTATTTGGACCGATCCAAATGTGTTTCTACCTGAAAGATTTTTAGAATGTGGAGAGGTTTTTAGAGGAGAAGATTTCGGGTTCATTCCATTTGGAGCTGGTAGGAGAATGTGTCCCGGTGTTCCATTTGCTCATAGGGTTGTGCATACCATGTTGGCCACTTTGCTTTACCATTTTGATTGGAAGCTACCTAATGGAGAAAAGATTGAAGATATGGACATGACTGAAAAATTTGGGATTACTCTGCACAAAGTCAAGCCTCTCATGGTTATTCCGGTCAAATCATGA 1497 0.3614 MDYITFIPLISFLYAFIHIIAFGLISKNTKCPNLPPGPPSYPLIGNLLQLGPSKLHQSLTKLSKTYGPIMSLKIGTINTVVISSPKIAKEALHKNDQALSNRLVPESVQALSHDKSSIIFMPISPKWKTLRKICATKIFSSQQLDFTQALRLKKLKELVVYLQENCRKGKAIDIGEVAFTISLNSISSTLFSIDLASFTSSSSQNFRDVISSMLIDASKPNIADYYPVLRKIDPQGAQRRMKNYYQKLITLFESIIKDRSNRMKYSKMEGSDVLDSFLDIIQKENPKLTLHEVLHLFLDLFVAGTDTTSATVEWAMAELLQNPKKLKKARKELQQVINKDEDPKDLDINKLPYLQAVVKETLRLHPSAPILVHKSISDVDLCGFKVPKDTQVLVNVWSMGRDSSIWTDPNVFLPERFLECGEVFRGEDFGFIPFGAGRRMCPGVPFAHRVVHTMLATLLYHFDWKLPNGEKIEDMDMTEKFGITLHKVKPLMVIPVKS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00469 498 SUPERFAMILY Cytochrome P450 35 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00469 498 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00469 498 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00469 498 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00469 498 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00469 498 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00469 498 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00469 498 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00469 498 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00469 498 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 11 497 - -
Trre7g00469 498 FunFam Cytochrome P450 76C4 26 494 - -
Trre7g00469 498 Gene3D Cytochrome P450 23 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00469 498 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00469 498 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00469 498 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g00469 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Trre7g00469 498 CDD CYP76-like 63 495 - -
Trre7g00469 498 Pfam Cytochrome P450 35 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00469 Trre-Chr7 2933869 2935754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00469 30 497 Cytochrome P450 AT2G45550 47.046 8.50e-158 456