Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00439 ATGGCAAAACAAGAAAAATCAAAACAAGGGTGTTTCACTAGTTTCATAAAAGTGCTTATTTGTGCTAGAAATGAAACTAGTCCACCAGTGTATCCATCTGAAAATGTTGAAGAAAAAGAATCAATTCAACACAAAAAAGATAAACTTTTTGATGATTCTATTACTACTCCTGGAGTAGTAGCAAGATTAATGGGTTTAGATTCACTTCCAAGCACCAAAAAGGTTGTTGTTAATGGAACAACCTTAGATTCTGTTCCAAGAAGTAAATCAGTTAACTTTGTTGATTATTTACTTGATTTTGATCAAAATATTACAAACCATCGTCGTGTGAAAACTTCAGCTTCTTTTAGAGAAGTTCCTTCATTTATTGAGAAGCAAAAAAATTACCTTTTTGTCCTTGATATTGATGATAAAAAGGGTAATAAGGTTCAAGAAGAAAATAGAGTTAACTTGAAGAAAAAGAACAAGGAAATTGTGAGAGTGAAGAAGGAAAGGAATCAAGGGAAGAACAAGAAAATTTCTAAGTTAAAAGATGAACCAAGAAGGGTTCCTTTTTCTTCCTCAAATACTTCTAAGTATAAATCAAAGGTTAGAAATTATGAAGGTAAAGATTTTTCAAGTGTTTCACCAAGATGTAATAATTGTAGTTATTATGGTTATGGTGATGTTGGTTCAAGTTCAAGTTCATGTTCAATATCTTCATTGCCAAATAGGCATAAGAAAGAGTATGTTGAACCAAAAATGAGGAACAAGATGAAAAATAATGTGTCACCAAAGAAGATTCAGACAGAACATAGCTTGGAGAATCTTAGTCCTGTTTCAGTTCTTGATGTTAATGATTATGCTTTTCTTTATGGAGCTGATTATTCAGGTACAAACATTTTGGCTTCAAAGTCAAAGAGGAAATATAAATCTTTATTGCCAGTGACAGTGTCCTTGGTAGGGTCCTTGGATTTGGATGAAGATGTTAATGACAAAGCAAACAATAATAAAGGTTATTATGCCCACACTGACATCAATAGAGAAGCAGAGTATTACTCAGACTTGATGTTGAAGCTTCGTATTTTGACAGAAGAAACTATAAAGGAGACAGATTGTACATCAAAGACTCAAAGCTTAGAGGAAATTGTTTTGGTTTTTGAACAATTAGTTTTTGATAATTTATTACTTGAGCTCTTGAATGAAGTTGTTGAATTTTCTTCTTAA 1206 0.3176 MAKQEKSKQGCFTSFIKVLICARNETSPPVYPSENVEEKESIQHKKDKLFDDSITTPGVVARLMGLDSLPSTKKVVVNGTTLDSVPRSKSVNFVDYLLDFDQNITNHRRVKTSASFREVPSFIEKQKNYLFVLDIDDKKGNKVQEENRVNLKKKNKEIVRVKKERNQGKNKKISKLKDEPRRVPFSSSNTSKYKSKVRNYEGKDFSSVSPRCNNCSYYGYGDVGSSSSSCSISSLPNRHKKEYVEPKMRNKMKNNVSPKKIQTEHSLENLSPVSVLDVNDYAFLYGADYSGTNILASKSKRKYKSLLPVTVSLVGSLDLDEDVNDKANNNKGYYAHTDINREAEYYSDLMLKLRILTEETIKETDCTSKTQSLEEIVLVFEQLVFDNLLLELLNEVVEFSS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00439 401 Pfam DUF761-associated sequence motif 55 73 IPR032795 -
Trre7g00439 401 PANTHER OS05G0128300 PROTEIN 1 400 - -
Trre7g00439 401 MobiDBLite consensus disorder prediction 164 191 - -
Trre7g00439 401 Coils Coil 151 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00439 Trre-Chr7 2749932 2752546 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00439 1 396 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 26.211 1.47e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00439 - - tpra:123924863 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00439 7 2749932 2752546 Trre13g01916 13 16279546 16282088 PCT