Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00407 ATGCCTTCATCTTCCACAACCATAGTTTCAAAATGCACAATCTACCCAAACCAAAAATCATCAATAAAATCCTTAAAACTCTCTGTTTCTGATCTTCCAATGCTTTCATGTCACTATATTCAAAAAGGAATTTTACTTTCTACACCCCCTTATTCCTTTGAAGACCTTATTCAAACCCTCAAAACCTCTCTCTCCATCACTCTCTCTCACTTCCCTCCTCTCGCCGGCCGACTCACCACCGACTCCGAAGGTTACATTTACATAACATCCAACGACGCCGGCGTCGATTTCATTCACTCCAAAGCCAAACACTTAACCGTAAACACCGTCCTTTCACCTTCTCTGATCGATGTTCATCCTTGTTTCAAAGAATTCTTCGCTTATGATATGCCGGTTTCTTACTCCGGTCACCAAAACCCTCTCGCCGCCGTTCAAGTAACTGAACTAGCCGATGGTGTTTTCATCGGTTGCACTGTTAATCATTCCGTAACCGACGGTACTTCTTTCTGGCACTTCTTTAACACGTTCGCCGCCGTCACTAAAGGCGGCGGTGGCGGCGCCGTCAAGATCTCAAAATCTCCAGATTTCATAAGAAACACAATCTTCAACTCAACCGCCGTCCTCCCTATCCCCGATGGCGGTCCCACCGTCACTTTCGACGTCGATGAGCCTCTCCGTGAACGTGTCTTTCATTTCTCTCGTGAATCCATTCTCAAACTCAAACAGAAAGCAAACAGTAACAGCAACGGTAACAGTAACGGTTTAACAGATCCAACGGAGGTAATAGCAAAACAAGCAAACGACAGTTGGAAAAACGTTAACTCTAACGGCCACGTTCACACAAACGGAACCGTTAAATCTAACGTGAGAAACGAGATCTCGTCGTTTCAATCGTTAAGTGCACAGTTATGGCGATCAGTAACACGTGCTCGAAAATTAGATTCAACCAAAACGTCGACGTTTCGTATGGCTGTAAATTGTCGTCATAGATTAAACCCAAAAATGGAAGCGTTTTATTTCGGGAACGCGATACAAAGCATCCCAACCGTTGCTTCAGTTAAAGATATTCTATCCAACGATCTAAAATACTGCGCTGGATTACTTCATCAAAACGTAGTCGCACATGATGATGCTACGGTGCGCCGCGGAGTAGAGGATTGGGAAAATAATCCAAGGTTATTTCCACTTGGGAATTTTGATGGTGCTATGATAACAATGGGTAGTTCACCTCGTTTTCCTATGTATGATAATGATTTTGGTTGGGGTATACCTTTGGCTATAAGAAGTGGAAAAGCTAATAAATTTGATGGGAAAATTTCAGCTTTTCCTGGTAGAGAAGGAAATGGAAGTGTTGATCTTGAAGTTGTTTTGAAACCTGAAACTATGGTTGGACTTGAAAATGACATTGATTTTATGCAGTATGTTACTGATGTATTGTAG 1440 0.4264 MPSSSTTIVSKCTIYPNQKSSIKSLKLSVSDLPMLSCHYIQKGILLSTPPYSFEDLIQTLKTSLSITLSHFPPLAGRLTTDSEGYIYITSNDAGVDFIHSKAKHLTVNTVLSPSLIDVHPCFKEFFAYDMPVSYSGHQNPLAAVQVTELADGVFIGCTVNHSVTDGTSFWHFFNTFAAVTKGGGGGAVKISKSPDFIRNTIFNSTAVLPIPDGGPTVTFDVDEPLRERVFHFSRESILKLKQKANSNSNGNSNGLTDPTEVIAKQANDSWKNVNSNGHVHTNGTVKSNVRNEISSFQSLSAQLWRSVTRARKLDSTKTSTFRMAVNCRHRLNPKMEAFYFGNAIQSIPTVASVKDILSNDLKYCAGLLHQNVVAHDDATVRRGVEDWENNPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGIPLAIRSGKANKFDGKISAFPGREGNGSVDLEVVLKPETMVGLENDIDFMQYVTDVL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00407 479 Pfam Transferase family 6 471 - -
Trre7g00407 479 Gene3D - 223 471 IPR023213 -
Trre7g00407 479 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 473 - -
Trre7g00407 479 Gene3D - 6 208 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00407 Trre-Chr7 2608260 2609699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00407 58 467 Monolignol Biosynthesis Gene Families AT5G48930 26.905 3.11e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00407 - - cam:101493121 790.03