Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00360 ATGAAGTTATTTCTTCTTTGCTTTCATTTTTTCTTCAGTTTCACATTTTCTCTCTCATCCGATGGTCTAGCACTTCTCTCTCTGAAATCTGCCGTTGATCAATCCGGCAATGGTGCTTTTTCCGATTGGAACGGCGGAGATTCTTACCCCTGCGGTTGGTCGGGAATCTCCTGTGCTAATATCTCCGGTCTACCGGAGCCACGTGTTGTTGGAATTGCACTCGCCGGAAAATCTCTCCGTGGTTATATTCCGTCGGAGCTCGGTACGCTTCGGTATCTTCGTCGTCTTAATCTTCATGATAATGAATTTTATGGTGTAGTTCCAGTTCAGCTGTTTAATGCTACTGCATTACATAGTATTTTTCTTCACCGGAATAATCTCTCCGGTCCGTTTCCGGTTTCCATTTGTACTGTTCCACGTCTTCAAAATCTTGACCTCTCTGACAATTCGTTCTCTGGTAGCATTCCTACTGATGTCAAGAAATGTAAGCAGATTCAAAGACTTATTCTAGCAAGGAACAAATTCTCCAGCGAGATTCCGGCCGGTGTGTGGTCGGAACTTGATAATCTCATCCAACTTGACCTCTCCGCCAACGATTTCAAAGGTCAAATCCCAGAAGATATTGGTGAACTTCATACCCTCTCCGGTACACTGAACCTCTCGTTCAACCACCTCTCCGGTAGGATTCCAAACTCACTCGGGAAATTGTCGGCCACCGTGAACTTTGATCTCCGAAACAACGACCTAATTGGCGAGATTCCCCAAACAGGAACATTTTCAAACCAGGGTCCAACTGCATTCCTCGGTAACAAAAACCTTTGTGGACTTCCACTTAGAAAATCCTGCACAGGTTCAGATCGAGCGTCAGGTGGTTCGTCTTCTCACGAAGACGAATCTCGTAACCGCTCGAAAGGGTTGAGCCCTGGTTTGATTATTTTGATCTCAGCAGCCGATGTTGCTGGGGTCGCTCTTGTTGGACTTGTGATTGTGTATGTTTATTGGAAGAAAAAGGATGATGGCAATGTATGTAGTTGCATTGGGAAGAGAAGATTTGGTGATGAGAATGAAAAAGAGAATCCTTGTACTTTACTTCCATGTATGAATAATTTGAGGAATGATGAAGACGGGGATGAGGGTGAAGTTGAGGTAGATGGAGGAGGGAAAGGGGAAGGTGAATTGGTGACAATTGATAAAGGTTTTAGAATTGAGCTTGATGAGCTTTTGAAGGCATCAGCATATGTGTTAGGGAAGAGTGCATTGGGGATTGTGTATAAGGTAGTGCTTGGAAATGGGATGCCAGTGGCTGTGAGGAGATTAGGAGAGGGTGGAGAAGAGAGGTATAAGGAGTTTGTGGCTGAGGTGCAAGCCATTGGGAAGGTGAAGCATCCTAATATTGTTAGGTTGAGAGCTTATTATTGGGCTCATGATGAAAAGCTTCTTATAAGTGATTTTATCTCCAACGGCAATTTGGGCAATGCACTTCGAGGGAGAAATGGCCAACCATCTTCTAACCTTTCATGGTCAACAAGGTTAAGAATTGCCAAAGGAATAGCAAGAGGTTTATCCTATCTTCATGAATTTAGTCCAAGAAAATTTGTCCATGGTGACATAAAACCAACAAACATCCTACTTGACAATGACTTACAACCCTACATTTCCGATTTCGGTCTTAACCGACTAATCAGCATCACAGGCAACAACCCTTCAACTGGTGGATTCATGGGTGGCGCTTTACCTTATTACGTGATGAAATCGTCACACAAAGAAAACCGAACAAATAATAGGTTGTCATTAGATAATGGTCGTGGTTGTAACAATTACAAAGCCCCCGAGGCTCGTGTACCTGGTTGTAGACCAACACAAAAATGGGATGTATATTCATTAGGTGTTGTTTTACTTGAATTGTTAACCGGGAAATCTACAGAAACTTCTCCCACATCGACGTCATCATCGGCTTCAGTTGAAGTTTCCGATTTGGTAAGGTGGGTTAGAAATGGTTTTGATCAAGAAAGTCCGTTATCCGAAATGGTCGATCCTTCATTGTTACAAGAAGTTCGTGCTAAGAAAGAAGTGTTAGCTGTGTTTCATGTTGCACTTGCTTGTACTGAAGGTGATCCTGAGGTTAGGCCTAGAATGAAAACTGTCTCTGAAAATCTTGAAAAAGTTGGAAGGTAG 2175 0.4308 MKLFLLCFHFFFSFTFSLSSDGLALLSLKSAVDQSGNGAFSDWNGGDSYPCGWSGISCANISGLPEPRVVGIALAGKSLRGYIPSELGTLRYLRRLNLHDNEFYGVVPVQLFNATALHSIFLHRNNLSGPFPVSICTVPRLQNLDLSDNSFSGSIPTDVKKCKQIQRLILARNKFSSEIPAGVWSELDNLIQLDLSANDFKGQIPEDIGELHTLSGTLNLSFNHLSGRIPNSLGKLSATVNFDLRNNDLIGEIPQTGTFSNQGPTAFLGNKNLCGLPLRKSCTGSDRASGGSSSHEDESRNRSKGLSPGLIILISAADVAGVALVGLVIVYVYWKKKDDGNVCSCIGKRRFGDENEKENPCTLLPCMNNLRNDEDGDEGEVEVDGGGKGEGELVTIDKGFRIELDELLKASAYVLGKSALGIVYKVVLGNGMPVAVRRLGEGGEERYKEFVAEVQAIGKVKHPNIVRLRAYYWAHDEKLLISDFISNGNLGNALRGRNGQPSSNLSWSTRLRIAKGIARGLSYLHEFSPRKFVHGDIKPTNILLDNDLQPYISDFGLNRLISITGNNPSTGGFMGGALPYYVMKSSHKENRTNNRLSLDNGRGCNNYKAPEARVPGCRPTQKWDVYSLGVVLLELLTGKSTETSPTSTSSSASVEVSDLVRWVRNGFDQESPLSEMVDPSLLQEVRAKKEVLAVFHVALACTEGDPEVRPRMKTVSENLEKVGR 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00360 724 FunFam Leucine-rich repeat receptor-like protein kinase 189 284 - -
Trre7g00360 724 Gene3D Ribonuclease Inhibitor 189 280 IPR032675 -
Trre7g00360 724 Gene3D Phosphorylase Kinase; domain 1 398 484 - -
Trre7g00360 724 FunFam Os07g0541700 protein 493 575 - -
Trre7g00360 724 Pfam Protein kinase domain 414 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00360 724 SMART serkin_6 409 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00360 724 ProSiteProfiles Protein kinase domain profile. 409 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00360 724 SUPERFAMILY Protein kinase-like (PK-like) 414 719 IPR011009 -
Trre7g00360 724 FunFam Leucine-rich repeat receptor-like protein kinase 392 484 - -
Trre7g00360 724 Gene3D Transferase(Phosphotransferase) domain 1 485 723 - -
Trre7g00360 724 MobiDBLite consensus disorder prediction 284 303 - -
Trre7g00360 724 SUPERFAMILY L domain-like 19 279 - -
Trre7g00360 724 Pfam Leucine rich repeat N-terminal domain 19 58 IPR013210 -
Trre7g00360 724 Gene3D Ribonuclease Inhibitor 17 188 IPR032675 -
Trre7g00360 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Trre7g00360 724 FunFam Leucine-rich repeat receptor-like protein kinase 18 181 - -
Trre7g00360 724 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 164 722 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00360 Trre-Chr7 2313012 2316599 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00360 13 722 Receptor kinase-like Gene Family AT1G67510 65.742 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre7g00360 Pkinase 2.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00360 - - gmx:100787556 1010.36