Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00342 ATGTTCATCCAAAAGGGTACAAAAGGTACTAATCAAGATGCAATGACAGTTTGGGAGAACTTTGCTGGAGAAGAAGACACAATTTTTTGTGGTGTGTTTGATGGTCATGGTCCTCGAGGACACAAATTTGCACAATCTATACGTGACAATCTACCCTCCAAACTCTCTACAACAATCAAAATGTCACAACAAAATGTCTCCAATGAAGTTGATGCTAATGCTACAAACAAAAGCACTTCTAATGATTCATGGGAAGAACAATTTTGTAGCACCTTCAATCAAATGGATGAACATCTTGCTAAGAACGTTGACACTGACGGACTTTGTGGAGGTTGCGTAGCGATAACTTTAATTAAACAGGGTGACCAATTGATAATTGGCAATTTAGGGGATTCTCGTGCAGTTCTCTGCACAAAAGAAGATGATAATCAACTTATTCCTATTCAACTTTCTGTTGATATGGTTCCAGATGTTCCAAGTGAAACTAATAGAGTGATTAAGTGTGGAGGTAGAGTTTTTGCAGCACAAGAAGATCCTGATGTAAAAAGAATTTGGATGCCTGAAGGTAATTGCCCTGGATTAGCTATGTCAAGAGCCTTTGGAGATTTTTGCCTAAAAGATCATGGCCTCTCCTCAGTTCCTGATTTATCTTATAGAAGACTTACAAAGCAAGATGAATTTGTTGTTTTGGCCTCTGATGGGATATGGAATGTGCTATCAAACGATGAAGTAATTAACGAAGTTGCATCAGCACCAAAGAGATCATTAGCAGCCAAATTGTTAGTCAAACGTGCAGTTAAAGCTTGGAAAAACAAGTATCCATTTTACTATGTTGATGATTGTTCAGCCATATGTTTGTTCTTGAATGATGAGTAA 876 0.3767 MFIQKGTKGTNQDAMTVWENFAGEEDTIFCGVFDGHGPRGHKFAQSIRDNLPSKLSTTIKMSQQNVSNEVDANATNKSTSNDSWEEQFCSTFNQMDEHLAKNVDTDGLCGGCVAITLIKQGDQLIIGNLGDSRAVLCTKEDDNQLIPIQLSVDMVPDVPSETNRVIKCGGRVFAAQEDPDVKRIWMPEGNCPGLAMSRAFGDFCLKDHGLSSVPDLSYRRLTKQDEFVVLASDGIWNVLSNDEVINEVASAPKRSLAAKLLVKRAVKAWKNKYPFYYVDDCSAICLFLNDE 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00342 291 ProSiteProfiles PPM-type phosphatase domain profile. 1 288 IPR001932 -
Trre7g00342 291 CDD PP2Cc 4 288 IPR001932 -
Trre7g00342 291 SUPERFAMILY PP2C-like 4 290 IPR036457 -
Trre7g00342 291 Pfam Protein phosphatase 2C 11 266 IPR001932 -
Trre7g00342 291 SMART PP2C_4 4 286 IPR001932 -
Trre7g00342 291 PANTHER PROTEIN PHOSPHATASE 5 286 IPR015655 GO:0004722|GO:0006470
Trre7g00342 291 Gene3D - 1 290 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00342 Trre-Chr7 2198664 2201333 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00342 1 290 PP2C-type Phosphatase Gene Family AT1G79630 47.590 3.73e-111 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00342 - - tpra:123922009 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g01748 13 14480322 14482619 Trre7g00342 7 2198664 2201333 PCT