Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00341 ATGGGAAGTTGTTGTAGCATCCAAGTTGAATGTGATCAAAAGATTATTGAAGGGGGGACCCGGGTCATATTAAATGGATCCTCTAAACATGTCTCAATGTTCATCCAAAAGGGTACAAAAGGTACTAATCAAGATGCAATGACAGTTTGGGAGAACTTTGCTGGAGAAGAAGACACAATTTTTTGTGGTGTGTTTGATGGTCATGGTCCTCGAGGACACAAATTTGCACAATCTATACGTGACAATCTACCCTCCAAACTCTCTACAACAATCAAAATGTCACAACAAAATGTCTCCAATGAAGTTGATGCTAATGCTACAAACAAAAGCACTTCTAATGATTCATGGGAAGAACAATTTTGTAGCACCTTCAATCAAATGGATGAACATCTTGCTAAGAACGTTGACACTGACGGACTTTGTGGAGGTTGCGTAGCGATAACTTTAATTAAACAGGGTGACCAATTGATAATTGGCAATTTAGGGGATTCTCGTGCAGTTCTCTGCACAAAAGAAGATGATAATCAACTTATTCCTATTCAACTTTCTGTTGATATGGTTCCAGATGTTCCAAGTGAAACTAATAGAGTGATTAAGTGTGGAGGTAGAGTTTTTGCAGCACAAGAAGATCCTGATGTAAAAAGAATTTGGATGCCTGAAGGTAATTGCCCTGGATTAGCTATGTCAAGAGCCTTTGGAGATTTTTGCCTAAAAGATCATGGCCTCTCCTCAGTTCCTGATTTATCTTATAGAAGACTTACAAAGCAAGATGAATTTGTTGTTTTGGCCTCTGATGGGATATGGAATGTGCTATCAAACGATGAAGTAATTAACGAAGTTGCATCAGCACCAAAGAGATCATTAGCAGCCAAATTGTTAGTCAAACGTGCAGTTAAAGCTTGGAAAAACAAGTATCCATTTTACTATGTTGATGATTGTTCAGCCATATGTTTGTTCTTGAATGATGAGTAA 972 0.3796 MGSCCSIQVECDQKIIEGGTRVILNGSSKHVSMFIQKGTKGTNQDAMTVWENFAGEEDTIFCGVFDGHGPRGHKFAQSIRDNLPSKLSTTIKMSQQNVSNEVDANATNKSTSNDSWEEQFCSTFNQMDEHLAKNVDTDGLCGGCVAITLIKQGDQLIIGNLGDSRAVLCTKEDDNQLIPIQLSVDMVPDVPSETNRVIKCGGRVFAAQEDPDVKRIWMPEGNCPGLAMSRAFGDFCLKDHGLSSVPDLSYRRLTKQDEFVVLASDGIWNVLSNDEVINEVASAPKRSLAAKLLVKRAVKAWKNKYPFYYVDDCSAICLFLNDE 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00341 323 PANTHER PROTEIN PHOSPHATASE 31 318 IPR015655 GO:0004722|GO:0006470
Trre7g00341 323 Gene3D - 23 322 IPR036457 -
Trre7g00341 323 SMART PP2C_4 24 318 IPR001932 -
Trre7g00341 323 SUPERFAMILY PP2C-like 22 322 IPR036457 -
Trre7g00341 323 ProSiteProfiles PPM-type phosphatase domain profile. 30 320 IPR001932 -
Trre7g00341 323 CDD PP2Cc 30 320 IPR001932 -
Trre7g00341 323 Pfam Protein phosphatase 2C 42 298 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00341 Trre-Chr7 2198568 2201333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00341 21 322 PP2C-type Phosphatase Gene Family AT1G79630 47.674 8.76e-115 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00341 - - tpra:123922009 615.92