Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00337 ATGTCTTATAGTTTCAACAACAACTTTTTCAACACCAATGATAATAGTACCAACACAACCACCTTGGATGTTGCTAAATTTGTTGGGTTTGATGAAGTAACTTACCCTTCTTATTCTGATTTTCCACCTGGTTTTAGCCCTGAGGACTTATTCAATTCACCTTCTTTTCTTTCTTCTCCTAAGATTCCTTCATCTTATACAACTGAGCCTTCTTCTGACCAAAGCATGAACCAACAACATAACAAGGAATTAGAAGAGATAAACTTATCTGAGCTCTCTTTCCAAACTCAAAAACAGAACATACATGATCTCTTTCAATCTTCCACAAATATGTTTCAAGTGGAGCCACTAAAGAAAGAGGACACATTGATATTCAATGAAACTACAAAGCAAAACAATTTTTCATTTGAGAGAACAACAAAACATGAAACAAAAACAAATTCTTCAGCTCCTAGTTCTACTTTTGTCAACAACAATAATGTTTCAATGTCTATTAAAGAACAAAGAAAATCAGAAGAAGATGGATACAAGTGGAGAAAATATGGAGAGAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGTTATTACAAGTGCACTAATCCTATTTGCTTGATGAAGAAGAAAGTTGAAAGGTCTTTGGATGGATATATTACTGAAATTGTTTATAAGGGAAATCATAACCATCCTAAGCCTTTGTCTACAAAAAGAAGAGCAAGTTCTCAATCAATGATTTCTGATTTTTCTTTGGGAGAGGATGAGTTTGAGCAAACATCACAAACTAGCTTTTCTGGAGGAGATTATGATGAGTTTGGACCTGAGGCCAAAAGATGGAAGGGAGATAATGAATCTTATTCCATAGAAGGTTGCAGAACTGTTAAGGAACCTAGAGTTGTGGTTCAAACTACAAGTGAAATTGATATACTTGATGATGGATATAGATGGAGGAAATATGGACAGAAAGTAGTCAAAGGAAATCCAAACCCAAGGAGCTACTACAAATGTGTAATCCAAAGTTGTCCCGTGAGAAAACATGTTGAGAGAGCAGCACATGATATGAAAGCAGTAATAACAACATATGAAGGGAAACATAACCATGATGTACCTTTAGGAAGAGGAAGTTCAAGCTATAACATGAACAAAACTTCTCTTAACAACAACACATGTAATGTAACACCTATTAGGCCTTCAACAATTACTAATTATTCTAGCTTATCAAATTTCTCAAATTCACTTCATGATGAATCAAAGCTGCCAAATTATGGAACTCAAGAAGATCAACATTTTCAGCATAAAAGCTTTTTGGATAAATCAATTGGTTCAAATACCAATTATGATCAATACTCGACTAAGGATTACTCCTTCATTCAGTCTTTTATGTCGAAGAACTTTTAA 1392 0.3405 MSYSFNNNFFNTNDNSTNTTTLDVAKFVGFDEVTYPSYSDFPPGFSPEDLFNSPSFLSSPKIPSSYTTEPSSDQSMNQQHNKELEEINLSELSFQTQKQNIHDLFQSSTNMFQVEPLKKEDTLIFNETTKQNNFSFERTTKHETKTNSSAPSSTFVNNNNVSMSIKEQRKSEEDGYKWRKYGEKQVKGSENPRSYYKCTNPICLMKKKVERSLDGYITEIVYKGNHNHPKPLSTKRRASSQSMISDFSLGEDEFEQTSQTSFSGGDYDEFGPEAKRWKGDNESYSIEGCRTVKEPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCVIQSCPVRKHVERAAHDMKAVITTYEGKHNHDVPLGRGSSSYNMNKTSLNNNTCNVTPIRPSTITNYSSLSNFSNSLHDESKLPNYGTQEDQHFQHKSFLDKSIGSNTNYDQYSTKDYSFIQSFMSKNF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00337 463 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 100 388 IPR044810 GO:0003700
Trre7g00337 463 SUPERFAMILY WRKY DNA-binding domain 300 368 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre7g00337 463 SUPERFAMILY WRKY DNA-binding domain 170 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre7g00337 463 ProSiteProfiles WRKY domain profile. 303 368 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g00337 463 Pfam WRKY DNA -binding domain 309 365 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g00337 463 Pfam WRKY DNA -binding domain 173 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g00337 463 ProSiteProfiles WRKY domain profile. 173 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g00337 463 MobiDBLite consensus disorder prediction 61 81 - -
Trre7g00337 463 FunFam WRKY transcription factor 33 295 361 - -
Trre7g00337 463 Gene3D WRKY domain 157 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre7g00337 463 Gene3D WRKY domain 293 369 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre7g00337 463 FunFam WRKY transcription factor 158 232 - -
Trre7g00337 463 SMART WRKY_cls 172 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g00337 463 SMART WRKY_cls 308 367 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00337 Trre-Chr7 2180001 2183291 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00337 154 402 WRKY Transcription Factor Family AT2G38470 56.997 1.47e-99 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre7g00337 WRKY 5.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00337 K13424 - gmx:100127367 496.123