Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00331 ATGGAACCAATTTTTGTTGAGATTGCTGCTGGAGAAGACATTGTGTCTACTCTTGTCAATTTGGCTCAATCTCATCAAGCGGCTGGAATCTTTGTGTCGAGTGGCATTGGTGCCGTTTCTGAAGTTGGCCTTTCCTACTCAGCGTCTCATACCCCTGCTTCTCCCTTCAAAGGATCGTTCCACATGACACGTCTCTGTGGAACTCACATCAATATCAATGATGATTGCATTCCTCCTCAATTCATGGACACTTATGGCAGATCTTCTTTTTTCTCCATTTTGTTCCATGACAATCATGGACAAAATTTTGGTGGAATTGTGGTAGGCAAGATTATGACTGCCGGTGTTGTTTTCGTGCAAGGTTTTCTTTTAAGAAAACCAAAATTTCGTAGGGTGGGAGAAATAAATGAAATTGTTGAAGGAAATGAAGAGGATGATGACTCGATTTATGATGATGACGACAATGACGATGTTGATGATGATGATGATGATGATGACGACGACGGCGATGGCGATGTTGATGCTGTCACCAATGCTGCTCATTGA 546 0.4212 MEPIFVEIAAGEDIVSTLVNLAQSHQAAGIFVSSGIGAVSEVGLSYSASHTPASPFKGSFHMTRLCGTHININDDCIPPQFMDTYGRSSFFSILFHDNHGQNFGGIVVGKIMTAGVVFVQGFLLRKPKFRRVGEINEIVEGNEEDDDSIYDDDDNDDVDDDDDDDDDDGDGDVDAVTNAAH 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00331 181 Gene3D - 3 139 - -
Trre7g00331 181 MobiDBLite consensus disorder prediction 140 181 - -
Trre7g00331 181 ProSiteProfiles PPC domain profile profile. 1 147 IPR005175 -
Trre7g00331 181 SUPERFAMILY AF0104/ALDC/Ptd012-like 1 123 - -
Trre7g00331 181 Pfam Plants and Prokaryotes Conserved (PCC) domain 3 118 IPR005175 -
Trre7g00331 181 MobiDBLite consensus disorder prediction 140 173 - -
Trre7g00331 181 CDD DUF296 3 122 IPR005175 -
Trre7g00331 181 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 143 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00331 Trre-Chr7 2153627 2154172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00331 1 132 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 26.866 1.52e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00331 - - psat:127080935 112.849