Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00327 ATGAGAAACTCATTTAGGACTTTTCACAAACACTTCACATTCATTTCCTTTCATAAAACTCCTCACTCTTATGGTTTTCTAACTTCTTCTTCTCCTACTCACCCCACTTTCTCTCAATTTCGCTCATCATACTCCTCATCTCCATCTTCTACATTTATGGAGGTATTGAAAGCAATTGCTAAGCAAGACCTTGCATCACAAGGAAATGTTGCTATCAGAGCTGATCAGAAGAGTTATAGTTACAAGCAACTTATCTCGTCGGCACAGAAGATATCTAATCTCTTGTGTGGAAGTGATGTCAAAGCAGGAAATCTTGGTGGAGCACGGGTAGGAATTGTAGCGAAACCCTCTGCTGAATTTGTTGCTGGAATACTTGGGACTTGGCTTAGTGGAGGTGTTGCTGTTCCACTTGCAGTAAGCTATCCAGAAGTAGAGCTCCTGTATGTGATGAATAATTCGGACACATCTGCAATACTGAGTACTGAAGATCATAGTGAATTAATGCAAAACATTGCCAATAAAACCTCTTCTCAATTTTTTCATCTTCCGCCTGTTGCTAATACGTCGTTGGAGAAGAATAGAGATGAACATTCCAATAATGGGGAATTTGATTCAAACGGAATTTTCCTGGAGAATATTCAAAGATCAAGTGAAGATCCAGCACTCATTTTGTACACTAGCGGAACAACAGGTAAACCTAAGGGAGTTGTTCATACACATGGAAGCATCATTGCTCAGGTCCAATCCTTGGCAAAAGCGTGGGAGTACACATCTGCTGATCAGTTTTTGCATTTGATTTGGGATATGTTTACAATGTCAATCCTTGACATAGATGATATACATGTCCACGGGCTTTTCAACGGTTTACTGGCCCCTCTCTACGCTGGCTCCACGGTTGAGTTTTTGCCAAAATTTAGTGTCAGGGGTGTTTGGCAGAGATGGCGTGAGTCATATCCAACTGACGGATCTAAGGCTGATGATGCTGTAACTGTTTTCACTGGAGTTCCAACTATATATGCCCGATTAATTCAAGGTTACCATGCAATGGATCCGGAGCTACAAGCTGCTTCAGCATCTGCTGCAAGGAACTTGCGTCTAATGATGTGTGGGTCCTCGGCACTTCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGTTTATTGGAACGATATGGCATGACTGAATTTGTCATGGCATTGTCAAATCCATTGAAAGGTGAGCGTAAGGCGGGCACAGTTGGAAAACCATTGCCCGGTGTGCAGGTCCAGATTCTTGCAGATGGGGAGAATTGGAGTGAAGGAACTGGAGCCAGCGGTGAGCTTTGCGTTAAAAGCCCTTCACTGTTTAAAGAATATTGGAAACTTCCAGAGGTAACGAAGGAATCATTTACGGAAGAAGGATTCTTTAAGACCGGAGATGCCGTTACAACAGATAAAGATGGATATTACATCATTCTAGGACGTACTAATGCGGATATCATCAAGGCCGGTGGTTATAAGCTCTCTGCATTAGAAATTGAATCAGTTATAATAGAGCATCCAGCTGTCTCAGAATGCTGTGTCTTGGGCTTACCACATAAAGAATATGGAGAAATTGTTGGTGCAATTATCGTTCCAGAGTCCGATGTTAAAAGAAAGCGAGATGAAGAGTCAAAGCCTGCTCTTAGCCTTGAAGAATTATCCACCTGGGCCAAAGATAAACTTGCACCTTACAAGATACCAACTCGACTTATCGTGTGGTATTCACTCCCCCGCAATGCAATGGGGAAGGTAAGTAAAAAAGAGCTGAAGAAGATGCTAGCTTCAGAACAGTAA 1824 0.4249 MRNSFRTFHKHFTFISFHKTPHSYGFLTSSSPTHPTFSQFRSSYSSSPSSTFMEVLKAIAKQDLASQGNVAIRADQKSYSYKQLISSAQKISNLLCGSDVKAGNLGGARVGIVAKPSAEFVAGILGTWLSGGVAVPLAVSYPEVELLYVMNNSDTSAILSTEDHSELMQNIANKTSSQFFHLPPVANTSLEKNRDEHSNNGEFDSNGIFLENIQRSSEDPALILYTSGTTGKPKGVVHTHGSIIAQVQSLAKAWEYTSADQFLHLIWDMFTMSILDIDDIHVHGLFNGLLAPLYAGSTVEFLPKFSVRGVWQRWRESYPTDGSKADDAVTVFTGVPTIYARLIQGYHAMDPELQAASASAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKAGTVGKPLPGVQVQILADGENWSEGTGASGELCVKSPSLFKEYWKLPEVTKESFTEEGFFKTGDAVTTDKDGYYIILGRTNADIIKAGGYKLSALEIESVIIEHPAVSECCVLGLPHKEYGEIVGAIIVPESDVKRKRDEESKPALSLEELSTWAKDKLAPYKIPTRLIVWYSLPRNAMGKVSKKELKKMLASEQ 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00327 607 Pfam AMP-binding enzyme C-terminal domain 508 593 IPR025110 -
Trre7g00327 607 CDD MCS 70 601 - -
Trre7g00327 607 SUPERFAMILY Acetyl-CoA synthetase-like 44 605 - -
Trre7g00327 607 Gene3D - 495 607 IPR045851 -
Trre7g00327 607 ProSitePatterns Putative AMP-binding domain signature. 223 234 IPR020845 -
Trre7g00327 607 Gene3D - 57 491 IPR042099 -
Trre7g00327 607 Pfam AMP-binding enzyme 68 497 IPR000873 -
Trre7g00327 607 PANTHER ACYL-COA SYNTHETASE 48 603 - -
Trre7g00327 607 FunFam Acyl-CoA synthetase family member 3 61 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00327 Trre-Chr7 2127537 2134913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00327 218 605 Monolignol Biosynthesis Gene Families AT4G19010 26.368 1.20e-37 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00327 K18660 - gmx:100813324 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00327 7 2127537 2134913 Trre7g00327 7 2127537 2134913 ECH