Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00311 ATGGTGCCACCATTGATACTACCAAAATTGAGTCTTGTGATTCTTGTATTCTGCATTTTAATCTCTTTTGATCAACACAAACACAACAACAACACCACCATTAACACAAAAAACAACACATTCAATTTCATCAACACCATTCCATTTCCATTACATTCTTTTTCTAGTGGTCCAGTTTCTTTATCTGCCACCACCACCAAAAACCATTATTCAGATTCTAATTCTCAATCTCTTCTTGAATATCATTTTTACCGTAATTCTTGTCCGAATGCTGAACGAATTGTCCGTTCTATGGTTCATCGGCTTTACAAAACTAATCATACTTTGATTCCTGCTCTTATTCGTCTTGCTTTTCATGATTGCTTCATTCAGGGATGTGATGCTTCTATTTTGTTAGAAGATGATGATTACATTGATTCAGAGAAAGAGTCACCTCCCAATGGAAGTCTCAAAGGATTTGATGCAATAGAGACCATTAAATCGAAGCTTGAAGAAACATGTCCTGGAGTTGTTTCTTGTGCTGATATTCTTGTGCTGGCTGCAAGAGACTCTGTTGCTCTGGTTGGTGGTCCATTCTATCCATTATATACAGGCAGGAGGGATGGTTCTAACTCTTTTGCTGACATAGCAACAGATGAACTTCCTTCACCCTATGCTGATTTATCTCAAATGCTCTCATCCTTCAAATTAAGGGGATTTGATGAAAGAGAAATGGTTACTCTCTTAGGTGCCCACAACATTGGTGTAATCCATTGCAAATTCTTCGAAAACCGTCTTTATAACCTCAGTGGAACTAATAAACCTGACCCTTCTATGAATACTGAATTTCTAAATGTACTAAGATCAAGATGCAATGAAACTGATGCATTGTCAAATTCAGCATCAGGATATACATCACATGCCTCATCTTCTTCCTTAGTTGAAGAGCAGCAAGAAATCACTATGGACTCTAAGGAATCTCTATCAGATTTCGGGATGTTATACTACCGCAACTTATTGCAAGGTAAAGGAATCCTCTATGCTGATCAGCAGCTAATGAAAGGTGAAAAAACAAAGTATTGGGTTCAAGAATATGCATCTAATCGTACTTTGTTCCGTCAAGATTTTGCACTGGCAATGATGAAACTCTCGGATCTTCGGGTTTTGACAATGCCTATGGGACAGATTCGACACACCTGTTCAAAAGTAGCATGA 1194 0.3794 MVPPLILPKLSLVILVFCILISFDQHKHNNNTTINTKNNTFNFINTIPFPLHSFSSGPVSLSATTTKNHYSDSNSQSLLEYHFYRNSCPNAERIVRSMVHRLYKTNHTLIPALIRLAFHDCFIQGCDASILLEDDDYIDSEKESPPNGSLKGFDAIETIKSKLEETCPGVVSCADILVLAARDSVALVGGPFYPLYTGRRDGSNSFADIATDELPSPYADLSQMLSSFKLRGFDEREMVTLLGAHNIGVIHCKFFENRLYNLSGTNKPDPSMNTEFLNVLRSRCNETDALSNSASGYTSHASSSSLVEEQQEITMDSKESLSDFGMLYYRNLLQGKGILYADQQLMKGEKTKYWVQEYASNRTLFRQDFALAMMKLSDLRVLTMPMGQIRHTCSKVA 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00311 397 CDD secretory_peroxidase 79 396 IPR033905 GO:0004601|GO:0042744
Trre7g00311 397 PRINTS Plant peroxidase signature 189 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00311 397 PRINTS Plant peroxidase signature 371 384 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00311 397 PRINTS Plant peroxidase signature 151 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00311 397 PRINTS Plant peroxidase signature 170 180 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00311 397 PRINTS Plant peroxidase signature 112 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00311 397 PRINTS Plant peroxidase signature 88 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00311 397 PRINTS Plant peroxidase signature 236 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00311 397 PRINTS Plant peroxidase signature 331 348 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00311 397 Gene3D - 82 396 - -
Trre7g00311 397 PANTHER PEROXIDASE 25-RELATED 56 384 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre7g00311 397 Gene3D Peroxidase, domain 2 215 376 - -
Trre7g00311 397 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00311 397 PRINTS Haem peroxidase superfamily signature 171 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00311 397 PRINTS Haem peroxidase superfamily signature 189 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00311 397 PRINTS Haem peroxidase superfamily signature 110 124 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00311 397 FunFam Peroxidase 82 224 - -
Trre7g00311 397 Pfam Peroxidase 95 361 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre7g00311 397 FunFam Peroxidase 215 376 - -
Trre7g00311 397 SUPERFAMILY Heme-dependent peroxidases 79 396 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre7g00311 397 ProSiteProfiles Plant heme peroxidase family profile. 78 397 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00311 Trre-Chr7 2048382 2050834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00311 76 396 Peroxidase AT4G33870 48.512 4.79e-116 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00311 K00430 - mof:131158483 421.779