Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00295 ATGCCAAAGAACATTCAAAAATCCCTACAAAATTATCTCTACAAAATCAAAACTCATCATAGGTCACAAAAATTTCGTATATCCTCTAAGAAATGGATTGCTTGCAAACATCCTAGAACTCCTTCTTTCTCGTTGGATGACAAAAACAACGACAACAACCAAAAGAATGACGATGAAGCTACATTAGCAGACATCGACCGTTTTCTCTTTGAGAATTTCAAGTCTTTATACCTCGAAGATGACGAAAAAACCGATTGTAATAACACTAAAAGGGTCGTATCATCAGAAGAGAAAGAAGAAGAAGACGAAGAAGAAGAAGAAGATGAAGAAGAAGAAACTCCAAAAGAAATAAATCCGAAATTGGGTCCCATATTTTTCGATTCATCTGAAGAAAGACCATTAGATCTTCGCGGATCTAATAAATTCTTCTTGACGCGTGGCTTCTCGGGCTCTGTGTCGAACACAACATCAACAACAGCAACAACAAACACATTTGAAGAAAACGGATCGTGCTCAAACTCATCAACCCCAAAAATCTTCAACAATAATTCATCTTCAAAGGAGGATCAAATGAATATTCCTCATAATTGTGTTGTTGTGTTGGCTAGTTCACCAAATCCTTATGATGATTTTCGAAGATCCATGGAAGAAACGGTGGAAGAAAGATTGAGGAACAATCAATGTGTGGATTGGGATTTTATGGAAGAACTTTTGTTTTGCTATATGAACTTGAATGAAAAGAAATCATATAAGTTTATATTAAGTGCTTTTTGTGACTTGGTATGTCTCATGAGGCAGAGTTCAGAGACCGAACCAATGAAGCCGCGTAGCGTTCGGACTGTTGGGATTGAGAGGGAGGTAAGGAAGAAGACTAAAGAATTAACATTAGAATTTGCAGGTTGA 903 0.3688 MPKNIQKSLQNYLYKIKTHHRSQKFRISSKKWIACKHPRTPSFSLDDKNNDNNQKNDDEATLADIDRFLFENFKSLYLEDDEKTDCNNTKRVVSSEEKEEEDEEEEEDEEEETPKEINPKLGPIFFDSSEERPLDLRGSNKFFLTRGFSGSVSNTTSTTATTNTFEENGSCSNSSTPKIFNNNSSSKEDQMNIPHNCVVVLASSPNPYDDFRRSMEETVEERLRNNQCVDWDFMEELLFCYMNLNEKKSYKFILSAFCDLVCLMRQSSETEPMKPRSVRTVGIEREVRKKTKELTLEFAG 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00295 300 Pfam Transcriptional repressor, ovate 204 262 IPR006458 -
Trre7g00295 300 Coils Coil 86 113 - -
Trre7g00295 300 NCBIfam uncharacterized plant-specific domain TIGR01568 198 262 IPR006458 -
Trre7g00295 300 MobiDBLite consensus disorder prediction 153 177 - -
Trre7g00295 300 MobiDBLite consensus disorder prediction 98 113 - -
Trre7g00295 300 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 63 265 IPR038933 GO:0045892
Trre7g00295 300 MobiDBLite consensus disorder prediction 86 127 - -
Trre7g00295 300 ProSiteProfiles OVATE domain profile. 200 263 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00295 Trre-Chr7 1975256 1976158 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre7g00295 Ovate 1.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00295 - - tpra:123921622 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00295 7 1975256 1976158 Trre7g00295 7 1975256 1976158 ECH
Trre11g04764 11 58945234 58946148 Trre7g00295 7 1975256 1976158 PCT