Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00289 ATGATTGGAAATGGCGGCACCATATCCCAAGGTTCTTTCTTATGTTACGCTTGTCAAATGCCTGCTAAGGTTGCTGTCTCAAGTATCCGAAGTTTTTGGGGACAAAGTTTCGAAAATAAACCAAGAGGAATGGCATTCACAGACATGTCTGCTGCGTCGAGCTTGCTTTTAAGTGGGGGTCAAAATCTTCTGTTTCGTACTATCCCTGTGTTACCTAGACTGCGCAAATCTTGTACATCTCCTCGAGCAATGAAGGATGGCTCTGCTGGCTATCGATACCCTCCGATGACCAAAAAACCAAGATGGTGGTGGAGAACATTATCATGCATCCCTTACCTCTTACCTTTCCATCAAGTATGGATGTATGCTCAGACAGCATACAATCTTCACCCGTTTCTCGAGAAGTTCGAATTCTACACGTACCCTTTTCTTATGTCAATTGGGACCCTACCTAGATGGTCTCTCATAGCATACTTCGTGATTGCATATCTTACAATTGTGAGGAGAAAAGAATGGCCTCATTTCTTCAGATATCATGTTGCATTAGGAATGTTAATCGAGATAGCCTTGCAGGTTACAGGCATCGTGAGCCGTTGGATGCCGAAATCATTCTACTGGGGTAAACTTGGAATGCATTTCTGGACTACTGCATTTTTCATTTTTCTCTTTACTACCATAGAGTGTATTAGATGCGCCCTTGTTGGTATGTATGCCGATATCCCTTTTGTCTGTGATGCAGCATATATCCAAATACCATATGAATAA 765 0.4235 MIGNGGTISQGSFLCYACQMPAKVAVSSIRSFWGQSFENKPRGMAFTDMSAASSLLLSGGQNLLFRTIPVLPRLRKSCTSPRAMKDGSAGYRYPPMTKKPRWWWRTLSCIPYLLPFHQVWMYAQTAYNLHPFLEKFEFYTYPFLMSIGTLPRWSLIAYFVIAYLTIVRRKEWPHFFRYHVALGMLIEIALQVTGIVSRWMPKSFYWGKLGMHFWTTAFFIFLFTTIECIRCALVGMYADIPFVCDAAYIQIPYE 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00289 254 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 25 253 IPR005691 -
Trre7g00289 254 NCBIfam Tic20 family chloroplast protein importer 1 254 IPR005691 -
Trre7g00289 254 Pfam Chloroplast import apparatus Tic20-like 75 247 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00289 Trre-Chr7 1933803 1935252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00289 45 250 Chloroplast and Mitochondria Gene Families AT4G03320 35.885 7.95e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00289 - - gmx:100791350 370.163