Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00270 ATGAGTTGCTCATTTAAGACATTCAACAAACAATTCCCTCTTTTTACTTTCCATCATCATCATCATCATCATCATAAACTCTCTCATCACCATTCTTCTTCTTTCACACTTAAATACTCTTACACCCACAAAATCTCTTCCTCTCTATTTCATTCATCATCATCACACTCATCATCTCAACCTGCTACATTTATGGAGGTCTTCAAAGCAGTTTCTAAGCAAGAACTTGCAGCTCATGGCAGTGTTGCTATCAGAGCTGATCAGAAGAGTTATACTTACAAGCAGCTTATCTCGTCGGTGCATAAGATATCTAATCTCTTGTGTGGAAATGATGTGAAGGGAAATCTTGGTGGAGCTCGAATAGGGATTGTAGCCAAACCGTCTGCTGAATTTGTTGCTGGAGTACTTGCGACTTGGTTTAGTGGAGGTGTTGCTGTTCCACTTGCACTCAGCTATCCAGAAGTAGAGCTCCTCTATGTGATGAATAATTCGGATGTGTCTGCCATACTGAGCACCGAAGATCATAGTGAATTAATGCAAAGCATTGCCAGTAAAACCTCTTCTCAGTTTTTTCATATTCCACCTGTTCCTTACAAGTCCTCAGAGAAGAGCAAAGATTCACAAAATGGTGAAAGTGATGCAGACAGAATTTTCCTTGAAAATATTGAACGATCAAGTGAAGATCCGGCACTGATTTTATATACTAGCGGGACAACAGGTAAACCTAAGGGAGTTGTTCATACACACAGAAGCATCATTTCTCAGGTCCAAACCTTGACGAAAGCATGGGGATACACATCTGCGGATCAGTTTTTGCATTGTCTACCACTACATCATATCCATGAAACTTTTCTTTTGTATGCATTAATCATTATTCGATACTTTCTACATGTCCATGGGCTTTTCAATGGTTTACTGGCCCCACTCTACGCAGGTTCCACGGTTGAGTTTTTGCCGAAATTCAGTGTCAGTGGAATTTGGAAGAGATGGCGCGAGTCATATCCATCCGAAGGATCTAAGTCTGAGGATGCTATAACCGTATTCACTGGAGTTCCGACTATGTACACCCGATTAATACAAGGTTATCATGCCATGGATTCTGAGCTGCAAGCCACATCAGCATCTGGCGCAAGGAACTTGCGTCTAATGATGTGTGGATCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAATCCATCACTGGACATCGCTTATTGGAGCGATATGGCATGACTGAATTTGTCATGGCAATATCAAATCCATTGAAAGGTGAACGTAAAGCAGGCACTGTTGGCAAACCATTTCCTGGTGTTCAGGTCAAGATTCTTGCAGATGAGGAGCATGAGAGTGAAGGATCTGGAACTGGTGAGCTTTGCGTTAAAAGCCCTTCACTGTTTAAAGAATATTGGAAACTTCCCGAGGTAACAAAGGAATCATTTACAGATGATGGATTCTTTAAGACCGGAGATGCTGTCACTACAGATAAAGATGGATATTTCATCATTCTAGGACGTAATAACGCGGATATAATCAAGAACGGTGGCTACAAGCTGTCTGCATTAGAAATTGAATCAGTAATAGTAGAGCATCCAACTGTCTCAGAATGTTGTGTTTTGGGTTTACCGGACAAAGACTACGGAGAAATTGTTTGTGCAATTGTCGTGCCAGCGACAAAGCAGGATAAAGAGTCAAAGTCTGCTCTAAGCCTCGAAGAAGTTTCCACTTGGGCAAAAAGTAAACTTGCACCTTACAAGATACCATCTCGACTAATCGTGTGGGAGTCACTCCCTCGCAATGCAATGGGAAAGGTAAATAAAAAAGAGCTTAAGAAGCTGGTGGTTCCAGAACAGTAA 1857 0.4168 MSCSFKTFNKQFPLFTFHHHHHHHHKLSHHHSSSFTLKYSYTHKISSSLFHSSSSHSSSQPATFMEVFKAVSKQELAAHGSVAIRADQKSYTYKQLISSVHKISNLLCGNDVKGNLGGARIGIVAKPSAEFVAGVLATWFSGGVAVPLALSYPEVELLYVMNNSDVSAILSTEDHSELMQSIASKTSSQFFHIPPVPYKSSEKSKDSQNGESDADRIFLENIERSSEDPALILYTSGTTGKPKGVVHTHRSIISQVQTLTKAWGYTSADQFLHCLPLHHIHETFLLYALIIIRYFLHVHGLFNGLLAPLYAGSTVEFLPKFSVSGIWKRWRESYPSEGSKSEDAITVFTGVPTMYTRLIQGYHAMDSELQATSASGARNLRLMMCGSSALPQPVMQEWESITGHRLLERYGMTEFVMAISNPLKGERKAGTVGKPFPGVQVKILADEEHESEGSGTGELCVKSPSLFKEYWKLPEVTKESFTDDGFFKTGDAVTTDKDGYFIILGRNNADIIKNGGYKLSALEIESVIVEHPTVSECCVLGLPDKDYGEIVCAIVVPATKQDKESKSALSLEEVSTWAKSKLAPYKIPSRLIVWESLPRNAMGKVNKKELKKLVVPEQ 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00270 618 PANTHER ACYL-COA SYNTHETASE 49 611 - -
Trre7g00270 618 Pfam AMP-binding enzyme 80 289 IPR000873 -
Trre7g00270 618 Pfam AMP-binding enzyme 295 508 IPR000873 -
Trre7g00270 618 Gene3D - 68 506 IPR042099 -
Trre7g00270 618 ProSitePatterns Putative AMP-binding domain signature. 232 243 IPR020845 -
Trre7g00270 618 Pfam AMP-binding enzyme C-terminal domain 523 604 IPR025110 -
Trre7g00270 618 Gene3D - 509 616 IPR045851 -
Trre7g00270 618 SUPERFAMILY Acetyl-CoA synthetase-like 61 614 - -
Trre7g00270 618 CDD MCS 81 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00270 Trre-Chr7 1809774 1815637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00270 227 614 Monolignol Biosynthesis Gene Families AT4G19010 28.960 1.80e-39 150