Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00253 ATGGAGTCCTTAAAATCACCTTTTAAGGGAATAATCAGTGACATAAGAGGAAGAGCACAATGTTATAAAGATGATTGGACTTGTGCTTTCCGTTCTGGTATTGGGATATTGGCTCCAACCACTTATATTTTTTTCGCTTCCGCTTTACCTGTTATTGCCTTCGGCGAGCAGCTGAGTCGAGACACAGATGGAAGATTGAGCACAGTAGAAACACTAGCTTCTACAGCCATTTGTGGAATAATACATTCAATAATTGGAGGTCAACCACTCCTTATTGTAGGAGTTGCAGAACCCACAATCATCATGTATACCTACTTGTACAACTTTGCCAAAAATCAGGATGACTTGGGACAGGAACTCTTTTTGGCTTGGGCTGGATGGGTTTGTGTATGGACTTCTCTCTTGCTGTTTCTCCTAGCAATATTCAATGCTGGTAATATCATCAACAGATTTACAAGGGTTGCTGAAGAGCTTTTTGGCATGCTGATTTCAGTCTTGTTCATTCAACAGGCTATTAAGGGAATGATAAAAGAGTTTAGTGCTCCTAAAAATGAAAACTCAATATTAGAGCACAACCAATTTCATTGGCTTTATGTGAATGGCTTACTAGGTATTATATTCACATTTGGCCTTCTCTATACAGCATTGAAGAGCAGAAGAGCAAGATCATGGTTATATGGGACAGGTTGGTTGAGAAGCTTTACTGCAGACTATGGTGTGCCTTTCTTGGTGGTAGTATGGACAGTTGTTTCATTCTCTATGCCAAGCAAAATACCTTCTGAAATTCCAAGAAGACTAGTTGCTCCCCTGGCTTGGGAATCTACATCTTTACACCATTGGACAGTAATCAAAGACATGGGAAGGGTTTCTCCAACATATATATTTGCTGCATTTATTCCAGCATTGATGGTAGCAGGGCTTTACTTCTTTGATCATAGTGTTGCTTCTGGGATGGCACAACAAAAGGAATTCAATCTCAAGAAACCTTCTGCATACCATTATGACATATTCTTACTAGGATTCATGACTTTGATTTGTGGACTACTTGGCTTACCACCTTCAAATGGTGTTCTGCCTCAATCACCTATGCATACTAAAAGCCTTGCAGTTCTTAAGGGTCTGATGATTAGAAGAAAGATGGTTGAAAGTGCGAAGGAAAGCATAAAAAAGAAAGCTAGCAACTCTGAAATCTATGGAAAGTTGCAAGCAGTGTTTGTAGAAATGGACAGCAGCCCAGTTACTTCTGTGGAAAGAGAACTAGAGAACTTAAAAGAGGTAGTCCTAAAAGGTGAAGATAAAGGAGACAACAAGAAGGATACATTTGACCCTGAGAAACATATTGATGCATATTTGCCTGTAAGAGTAAATGAACAAAGAATGAGCAATCTTTTACAATCAGTCTTTGTTGGAGCATCAGTTTTTGCTATGCCTGTCATAAAAAAGATTCCAACTTCTGTTTTGTGGGGATATTTTGCATACATGGCTATTGATAGTCTTCCTGGTAACCAATTCTGGGAAAGGATACTACTTCTCTTTGTAGCACCTAGTAGGTGGTTCAAGTTATTGGAAGGTCACCATGCTTCTTTTGTGGAATCAGTACCAATTAGATACATAGTCTTGTTCACAATATTCCAATGTGTGTATTTCTTGGTTTGTTTTGGAGTAACATGGATTCCAATAGCTGGAATCTTGTTCCCTTTGCCTTTCTTTCTATTGATATTGGTGAGGCAGTATATTCTCCCCAAGCTGTTTAGTCCTCATCATCTAAGAGAACTAGATGCAGCTGAATATGAAGAAATTGCTGGTGCTCCAAGACTCTCTAGGGATTCGCCTAGTTTTGGATCAATGGAAGTGTCTGATAGTGAAATATTAGATGAATTAACTACCAATAGAGGAGAGTTGAAGGTCAGAACTCTAAGCTTTAGAGAGGAAAGACATGGTCAAGTAAGTGGTTACTACAATTAA 1965 0.3893 MESLKSPFKGIISDIRGRAQCYKDDWTCAFRSGIGILAPTTYIFFASALPVIAFGEQLSRDTDGRLSTVETLASTAICGIIHSIIGGQPLLIVGVAEPTIIMYTYLYNFAKNQDDLGQELFLAWAGWVCVWTSLLLFLLAIFNAGNIINRFTRVAEELFGMLISVLFIQQAIKGMIKEFSAPKNENSILEHNQFHWLYVNGLLGIIFTFGLLYTALKSRRARSWLYGTGWLRSFTADYGVPFLVVVWTVVSFSMPSKIPSEIPRRLVAPLAWESTSLHHWTVIKDMGRVSPTYIFAAFIPALMVAGLYFFDHSVASGMAQQKEFNLKKPSAYHYDIFLLGFMTLICGLLGLPPSNGVLPQSPMHTKSLAVLKGLMIRRKMVESAKESIKKKASNSEIYGKLQAVFVEMDSSPVTSVERELENLKEVVLKGEDKGDNKKDTFDPEKHIDAYLPVRVNEQRMSNLLQSVFVGASVFAMPVIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVAPSRWFKLLEGHHASFVESVPIRYIVLFTIFQCVYFLVCFGVTWIPIAGILFPLPFFLLILVRQYILPKLFSPHHLRELDAAEYEEIAGAPRLSRDSPSFGSMEVSDSEILDELTTNRGELKVRTLSFREERHGQVSGYYN 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00253 654 Gene3D Helical hairpin bin 18 60 - -
Trre7g00253 654 PANTHER ANION EXCHANGE PROTEIN 5 601 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trre7g00253 654 FunFam probable boron transporter 2 18 60 - -
Trre7g00253 654 Coils Coil 413 433 - -
Trre7g00253 654 Pfam HCO3- transporter family 7 182 IPR011531 GO:0006820|GO:0016020
Trre7g00253 654 Pfam HCO3- transporter family 453 543 IPR011531 GO:0006820|GO:0016020
Trre7g00253 654 Pfam HCO3- transporter family 199 371 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00253 Trre-Chr7 1684390 1689997 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00253 1 649 Antiporters AT1G74810 69.394 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00253 K24194 - gmx:100811184 1052.35