Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00251 ATGGAGTGCTTAAAATCACCTTTTAAAGGAATTGTTAGTGATATAAGAGGAAGAGCACAATGCTATAAAGATGATTGGACTTGTGCTTTATGTTCCGGTATCGGGATATTGGCTCCAACTACCTATATTTTCTTTGCTTCTGCTTTACCGGTTATTGCCTTCGGCGAACAGCTGAATCAAGACACAGATGGAAGATTGAGCACAGTAGAAACACTAGCTTCTACAGCCATTTGTGGAATGATACATTCAATAATTGGAGGTCAACCACTCCTTATTGTAGGAGTTGCAGAACCCACCATCATCATGTATACCTACTTGTACAACTTTGCCAAAGATCAGGATGGCCTTGGACAAGAACTTTTTTTGGCTTGGGCTGGATGGGTTTGTGTATGGACATCTCTCTTGCTTTTTCTCCTAGCAATATTCAATGCTGGTAATATCATCAACAGATTTACAAGGGTTGCTGAAGAGCTTTTTGGCATGCTGATATCAGTCTTGTTCATTCAACAGGCTATTAAGGGAATGATAAAAGAGTTTAGTGCTCAAAAAAATGAAAACTCAATATTAGAGCACAACCAATTTCATTGGCTCTATGTGAATGGCTTATTAGGTATTATATTCACATTTGGCCTTCTGTATACAACATTGAAGAGCATAAGAGCAAGATCTTGGTTATATGGGACAGGTTGGTTGAGAAGCTTCATTGCTGACTATGGTGTGCCTTTCATGGTGGTGGTATGGACAGCTGTGTCATTCGCAGTGCCAAGCACAATACCTTCTGAAATTCCAAGAAGACTAATTGCTCCTCTGGCTTGGGAATCTACATCTTTACACCATTGGACAGTTATTAAAGACATGGGGAAGGTTTCTCCAACATATATTTTTGCTGCTTTTATTCCAGCATTGATGGTAGCAGGGCTTTACTTCTTTGATCATAGTGTTGCTTCTGGGATGGCACAACAAAAGGAATTCAATCTCAAGAAACCTTCTGCATACCATTATGACATATTCTTACTAGGATTCATGACTTTGATATGTGGACTACTTGGCTTACCTCCTTCAAATGGTGTTCTGCCTCAATCACCTATGCACACTAAGAGCCTTGCAGTTCTTAAGGGTCTGATGATGAGAAGAAAGATGGTCGAAAGTGCGAAGGAAAGCATAAAAAAGAAAGCTAGCAACTCTGAAATCTATGGAAAGATGCAAGCAGTGTTTGTAGAAATGGACAGCAGCCCGGTTACTTGTGTGGAAAGAGAATTAGAGAACTTAAAAGATGTTGTCCTAAAAAGTGATGATAAAGGAGAAAACAAGAAGGATATACATTTGACCTTGAGAAGCATATTGAAGCATGTTTGCCTGTTAGAGTAA 1368 0.3933 MECLKSPFKGIVSDIRGRAQCYKDDWTCALCSGIGILAPTTYIFFASALPVIAFGEQLNQDTDGRLSTVETLASTAICGMIHSIIGGQPLLIVGVAEPTIIMYTYLYNFAKDQDGLGQELFLAWAGWVCVWTSLLLFLLAIFNAGNIINRFTRVAEELFGMLISVLFIQQAIKGMIKEFSAQKNENSILEHNQFHWLYVNGLLGIIFTFGLLYTTLKSIRARSWLYGTGWLRSFIADYGVPFMVVVWTAVSFAVPSTIPSEIPRRLIAPLAWESTSLHHWTVIKDMGKVSPTYIFAAFIPALMVAGLYFFDHSVASGMAQQKEFNLKKPSAYHYDIFLLGFMTLICGLLGLPPSNGVLPQSPMHTKSLAVLKGLMMRRKMVESAKESIKKKASNSEIYGKMQAVFVEMDSSPVTCVERELENLKDVVLKSDDKGENKKDIHLTLRSILKHVCLLE 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00251 455 PRINTS HCO3- transporter superfamily signature 237 246 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trre7g00251 455 PRINTS HCO3- transporter superfamily signature 51 62 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trre7g00251 455 PRINTS HCO3- transporter superfamily signature 320 333 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trre7g00251 455 PRINTS HCO3- transporter superfamily signature 166 178 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trre7g00251 455 Pfam HCO3- transporter family 201 372 IPR011531 GO:0006820|GO:0016020
Trre7g00251 455 Pfam HCO3- transporter family 7 184 IPR011531 GO:0006820|GO:0016020
Trre7g00251 455 Gene3D Helical hairpin bin 18 60 - -
Trre7g00251 455 PANTHER ANION EXCHANGE PROTEIN 6 390 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00251 Trre-Chr7 1677295 1681490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00251 1 439 Antiporters AT1G74810 69.820 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00251 K24194 - zju:107409203 704.901