Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00249 ATGCCTATCATAAAAAAGATTCCAACTTCTGTTTTGTGGGGATATTTTGCATACATGGCCATTGATAGTCTTCCTGGTAACCAATTCTGGGAAAGGATATTACTTCTCTTTGTAACACCTGGTAGGTGGTTCAAGTTATTGGAGAGTCCCCATGCTTCTTTTGTGGAATCAGTACCAATTAGATACATAGTCTTGTTCACAATATTCCAATGTGTGTATTTCTTGGTTTGTTTTGGAGTAACATGGATTCCAATAGCTGGAATCTTGTTCCCTTTGCCTTTCTTTCTATTGATATTGGTGAGGCAGTATATTCTCCCCAAGCTGTTTAGTCCTCATCATCTTAGAGAACTAGATGCTGCTGAATATGAAGAAATTGTTGGTGCTCCAAGACTCTCATTAAGTATAGATTCACCTAGTTTTGGATCAATGGAAGTGTCTGATAGTGAAATATTAGATGAATTAACTACAAGCAGAGGAGAGTTGAAGGTCAGAACTCTAAGCTTTAGAGAGGAAAGACATGGTCAAGTAAGTGATTACTACAATTAA 546 0.3718 MPIIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPGRWFKLLESPHASFVESVPIRYIVLFTIFQCVYFLVCFGVTWIPIAGILFPLPFFLLILVRQYILPKLFSPHHLRELDAAEYEEIVGAPRLSLSIDSPSFGSMEVSDSEILDELTTSRGELKVRTLSFREERHGQVSDYYN 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00249 181 PANTHER ANION EXCHANGE PROTEIN 1 126 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trre7g00249 181 Pfam HCO3- transporter family 2 68 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00249 Trre-Chr7 1676141 1677235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00249 1 176 Antiporters AT1G15460 67.039 1.05e-77 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00249 K24194 - lja:Lj0g3v0163139.3 295.049