Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00186 ATGTCATCATCGTCGATAACGCTAAAACCTGACAAGTCGATGAGACGACAACTTCATTGTCCTCTTCCAAAGTTGTCTGTGAGCAAAAGAGGAAGGAAAGAACGATTTAGAATTAGATGGAGGGTGTTTTCTTTGAAGGAATTATACTCTGCTACCAATTATTTCAACTATGACAACAAGCTTGCAGAAGGGAACTTTTGTACTGTGTACCGGGGAAAACTTTGGAATGGATCTCAAGTAGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCAGACAGGGAATTTACAGTTGAACTCGAGATATTAGGAAGAGTACAACACAAGAATCTTATTGGTTTACACGGCTATTGTGCCGAAGGAAAAGAACGATTAATTGTGTGTGATTATATGCCAAATTTTAACCTGTTCTCCCATCTTCATGGACCACAATCAGCAGAATGCCTTCTTAATTGGAATCGGCGTATGAATATTGCCATTGGATGTGCCGAGGGAGTTGTATACCTTCACCCCCAAGCAACACCGCGCATCATCCACAGGGATATCAAGTCAAGTAGTGTGTTGTTGGATTCAAATTTCAAATCCTTAATTGGTGGTTTCGGGTTTGCTAGGTTGATCCCTGATGGCGAAAGTGACTACAAATGTTAA 645 0.4047 MSSSSITLKPDKSMRRQLHCPLPKLSVSKRGRKERFRIRWRVFSLKELYSATNYFNYDNKLAEGNFCTVYRGKLWNGSQVVKRLKVWSNKADREFTVELEILGRVQHKNLIGLHGYCAEGKERLIVCDYMPNFNLFSHLHGPQSAECLLNWNRRMNIAIGCAEGVVYLHPQATPRIIHRDIKSSSVLLDSNFKSLIGGFGFARLIPDGESDYKC 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00186 214 SUPERFAMILY Protein kinase-like (PK-like) 35 210 IPR011009 -
Trre7g00186 214 Gene3D Transferase(Phosphotransferase) domain 1 130 213 - -
Trre7g00186 214 Gene3D Phosphorylase Kinase; domain 1 23 129 - -
Trre7g00186 214 Pfam Protein tyrosine and serine/threonine kinase 57 207 IPR001245 GO:0004672|GO:0006468
Trre7g00186 214 ProSiteProfiles Protein kinase domain profile. 55 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00186 214 PANTHER OS01G0253100 PROTEIN 29 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00186 Trre-Chr7 1326904 1328936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00186 42 207 Trihelix Transcription Factor Family AT1G68690 47.305 1.13e-45 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Trre7g00186 PK_Tyr_Ser-Thr 2.9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00186 - - csin:114282129 271.937