Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00159 ATGGGCCTTGTTAGTGACCCACAGCCTACGCCATTAAATACTTTTGTTTTGTTGAGGGGAAGATCCACACACTACCAAACTATTCTCCTCACAACCTCAGCAACCACCCTTCTTCACTCTCATATTTACCCAAAATTAATGGAGGAGTCGGGAGAAAATTGGCCTTCTGAGTCTGATTTGGTAATTGGTGATGATGTAATTTTTGAAGATGGATATCAATCTGAATCTGTGTGTGGTGATAGAGAAATTAAGGAGAAATTGATGACACTTTCAGCCACCATAGGCTTGAACAAGATGGACGACAGTACAATCCTAGACAAAGCTAAACACTACGTGGAAAATCTTCAAAAACGTGTGAAAGAGCTAGAACAAGAAGTTAACAGTAGTGTCTTGCAATTTGGAAAATCCAACCTTGACATCACCATTGTTGCGCAGATGGGTGATGGATACAACATTACAGTGGATGAATTAGTGAAAACCCTGAGATTAGCGATCTCTACACAATAG 507 0.4024 MGLVSDPQPTPLNTFVLLRGRSTHYQTILLTTSATTLLHSHIYPKLMEESGENWPSESDLVIGDDVIFEDGYQSESVCGDREIKEKLMTLSATIGLNKMDDSTILDKAKHYVENLQKRVKELEQEVNSSVLQFGKSNLDITIVAQMGDGYNITVDELVKTLRLAISTQ 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00159 168 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 82 132 IPR036638 GO:0046983
Trre7g00159 168 Gene3D - 80 130 IPR036638 GO:0046983
Trre7g00159 168 Coils Coil 105 132 - -
Trre7g00159 168 PANTHER BHLH TRANSCRIPTION FACTOR 126 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00159 Trre-Chr7 1109939 1116799 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00159 - - tpra:123921504 148.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g00159 7 1109939 1116799 Trre11g00102 11 823581 827087 PCT