Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00148 ATGACTTTGACCACCGCAGGTAGCAAGAAATATGAACACTTGCTGAAACTTGAGAGAGCTTCTGAGAACCTTACACTTTTCGAAGCAGATATCTTGAATTATGAATCTGTTCACAAAGCAATTGTCGGATGCAGTGCCGTTTTCCATGTTGCTAGTCCTGTACCTTCGACAGTTGTACCAAATCCTGAGGTGGAAGTGATTGAGCCTGCAGTGAAGGGAACTACTAAAGTACTTGAAGCTTGTCTCAAAGCTAAAGTGGAACGTGTCGTCTTTGTATCGTCTGGAGCTGCTGTTGCTTTCAATCCTAACTTCCCGAAAGATAAAGTGATTGACGAGTCTTGTTGGTCTGACAAAGACTACTGCAAAAAAACTAAGAACTGGTATTGTTATGCCAAGACAGAAGCAGAAGAGCAGGCCCTGAATTTCGCGAAAAGAACCGGGCTTGATGTTGTAAGCATTTGTCCTACCCTTGTTTTGGGGCCAATTTTACAGTCAACTACTAATTCGAGTACCTTGGTTCTCATCAAACTTTTAAAAGGCTGTGGTACATTGGAGAATAAGCATCGTTGGATAGTTGACGTACGAGACGTAGTTGATGCGATACTTTTGGCTTATGAGAATCACAATGCAGAAGGGAGATACATATGCACTTCACACACTATCACGGAACGAGATTTGGTGGAGAAATTGAAGAGTATATTTCCAAACTACAAGTACCCTACAAACTATACTGAGGTGGATGATTATAGAATGTTGAGCTCAGAGAAACTGCAAAGTTTAGGTTGGAAATTCAGGCCTTTGGAGGAAACACTTATTGATTCTGTTAAAAGCTATGAAGAAGCTGGACTAGTTCAATCACAATGA 864 0.4109 MTLTTAGSKKYEHLLKLERASENLTLFEADILNYESVHKAIVGCSAVFHVASPVPSTVVPNPEVEVIEPAVKGTTKVLEACLKAKVERVVFVSSGAAVAFNPNFPKDKVIDESCWSDKDYCKKTKNWYCYAKTEAEEQALNFAKRTGLDVVSICPTLVLGPILQSTTNSSTLVLIKLLKGCGTLENKHRWIVDVRDVVDAILLAYENHNAEGRYICTSHTITERDLVEKLKSIFPNYKYPTNYTEVDDYRMLSSEKLQSLGWKFRPLEETLIDSVKSYEEAGLVQSQ 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00148 287 FunFam Dihydroflavonol reductase 4 286 - -
Trre7g00148 287 Pfam NAD dependent epimerase/dehydratase family 18 210 IPR001509 -
Trre7g00148 287 CDD FR_SDR_e 4 262 - -
Trre7g00148 287 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 14 275 - -
Trre7g00148 287 Gene3D - 1 287 - -
Trre7g00148 287 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 279 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00148 Trre-Chr7 1018475 1020030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00148 2 284 Monolignol Biosynthesis Gene Families AT2G33590 58.947 7.78e-119 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00148 - - gmx:100784817 425.631