Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00141 ATGGAAAGCAAAGACAACATTGAAGCTTTCAGAAAGTTCTTAAATTCTAGCTTAGAAACATCAAAAGCTATTTCTTCTGCATTAGATGAATCTGGTTCAAGATTGAAGCTACTTAACCAAAGATTTCTATCCATGCAAGCTTCTCTTAGACCAATCTCAATGCAAAACCTTCCTTTTTCTGATGTTGACCATGGTTTAGACAGTGTTCTATGTACTGTTTCAGCAGTCCATAAGGTTTTTCAATGTGTTAACCACTTGGAACATTCTCTTTCAGCAGACGCAAGTTCGGATTTGTTCACATATGTCTCAAACACAAAGAAGCTTGAAGAAGCATTGAAGCTTCTCACTGATAATTGTAAGTTAGCAACTAGTTGGTTGAAGAGTGTTTTTAAGTTCTTACAAAACAAAACAACAATTAATACTAATGAGGTTTACCTATTGAATATAAAGAAATCCTTGAGAATATTACAAGAATTGCAGGCCATAGAGGACGATGCGCGCCTGGATGGAGGAATTCTCAGTATTGCCCTTGACAAACTAGAGATTGCTTTTCATAAACTTCTAATGGAAAATTCTACACCTCTTCCTTTGGTTTCATTGACATCACAGATTGATCAGCAAAACAATGTCGCGGAACAAGGTTTGAAATTTCCAAGTTCTTTAACAGGGAAACTTCAGGTCATCGTTGAGAGATTAAATGCTAATAACAGGCTAGACAAGTCTCAAACTATGTATGTTGAAGTTCGAGGTACAAATGCTCGCCGAAGTTTGAAGACTTTGGATTTGAGCTACCTTGAGACTTCAACTGCTGAGTTTGAGGTTGCACATGGAATGGAAAATTGCATAGATCAATGGGGAAAGCATTTGGAGTTGGTTGTTACGAAACTTCTTGAGGTCGAATACAAACTATGTACTATTGTATTTGAGAAAATTGGTTCAAAAGCATGGATAAGTTGTTTTGCAAAGATTGCTATTGAATCAAGAATCTTTTCATTTATCAAATTTGGAAAGGTTGTTACTGAGAAGAAAAATGATCCTTTCAAGTTGTTGAATTTGTTGTCAATGTTTAAGATTTTGAATGGTTTAAGACTAAAATTTAATCAACTTTTTAGAGGGGAAGCTTGTGAAGAAATTAGAATTGTTACTAAGGATCTTATCACAAGAGTTGTGAATGGTGCTAGTGAGATATTCTTGCAACTTTCAGAACAAGTGAAGTTGCAAAGACCAACTTGTCCTCCCTCAGATTGCACTGTTCCTAAGCTGGTAAGTTTTGTTACTGATTATTGCAATAAGCTTCTTAGTGATGAGTATAAGCCACATTTGAATAAGGTTTTGGAAATATATCTTAGTTGGAGAAATGAAAAATATGAAGAGGGTATTTTTGTAACTCAAATATATAGCATAATTAAGGAAGTTGCAGTAAATTTGGATAATTGGTCAAAAGCATATGAAGATATCAATTTGTCCTATTTTTTTATGATGAATAATCATTGTCATTTCTACAATTTAAAGGGTACTTTAGTTGGGAATATGATGGGAGATTCTTGGTTAAGATCACATGAACAATATAAAGAATATTATGCATCACTTTATTTGAGGAATACTTGGGGAAATCTTAAAAATATTCTTGTAGTTTCATCTTCTATGACTTGTCAAGATTTAGCTAAGAGAATAAATGCTTTTACTCTAGCTTTTGATGAAAGGTACAAGAAACAATGTAATTTGATAATCTATGATGAGATATTGAGGGAAATTGTATGTAAGCATTTGGTGGAAGGTATTATACCAATTTATAAGGTTTATTTGAAGAATTATATTTTGGCACTTGAAAGTGATGATGCTATGGTTGACAACAAGAGTATTAAATATACAGCACAAAGTTTGGAAAATAGGATTTGGTCAATTTTTCAACCAAAGTTGAGAAAGCATGGTGATAGCATTAAACATACAGATTTGATTAGTAAAATAAAAGAAGTGAGTCATCAATTTCGTTTGACTTTAGTTGGTTTATAG 2013 0.3308 MESKDNIEAFRKFLNSSLETSKAISSALDESGSRLKLLNQRFLSMQASLRPISMQNLPFSDVDHGLDSVLCTVSAVHKVFQCVNHLEHSLSADASSDLFTYVSNTKKLEEALKLLTDNCKLATSWLKSVFKFLQNKTTINTNEVYLLNIKKSLRILQELQAIEDDARLDGGILSIALDKLEIAFHKLLMENSTPLPLVSLTSQIDQQNNVAEQGLKFPSSLTGKLQVIVERLNANNRLDKSQTMYVEVRGTNARRSLKTLDLSYLETSTAEFEVAHGMENCIDQWGKHLELVVTKLLEVEYKLCTIVFEKIGSKAWISCFAKIAIESRIFSFIKFGKVVTEKKNDPFKLLNLLSMFKILNGLRLKFNQLFRGEACEEIRIVTKDLITRVVNGASEIFLQLSEQVKLQRPTCPPSDCTVPKLVSFVTDYCNKLLSDEYKPHLNKVLEIYLSWRNEKYEEGIFVTQIYSIIKEVAVNLDNWSKAYEDINLSYFFMMNNHCHFYNLKGTLVGNMMGDSWLRSHEQYKEYYASLYLRNTWGNLKNILVVSSSMTCQDLAKRINAFTLAFDERYKKQCNLIIYDEILREIVCKHLVEGIIPIYKVYLKNYILALESDDAMVDNKSIKYTAQSLENRIWSIFQPKLRKHGDSIKHTDLISKIKEVSHQFRLTLVGL 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00141 670 Pfam Exo70 exocyst complex subunit 284 632 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre7g00141 670 SUPERFAMILY Cullin repeat-like 76 636 IPR016159 -
Trre7g00141 670 Gene3D Exocyst complex component Exo70 131 643 - -
Trre7g00141 670 PANTHER EXOCYST COMPLEX PROTEIN EXO70 142 632 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00141 Trre-Chr7 922299 924311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00141 9 657 EXO70 exocyst subunit family AT4G31540 45.646 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00141 K07195 - gmx:121175138 901.353