Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00130 ATGAAGTGCAATAAAGCTTGTGAACTTTGCAATCAAAATGCTTCTTTCTATTGTCCTTCCGATTCGGCTTTTCTTTGCCGGAACTGCGACGACGCCGTTCACGGTGCCAACTTCCTCGTCGCTCGCCACATCCGTCACATTATCTGCTCAAAATGCCACGGTTTCACTGGAAATCACATCTCCGGGACTACACTCCACCATAGATTCCGATCAACTTGCCGTTCTTGCTTGCCGGAAAATCATTCCGATGATGCAGATTCTCAATCTTCTTCATCTTTTGAGTCTTGCGTTACGGAACCGAAGGAGAGAAAAGTTAAAAGGATGAAGAGTTTTTCAAGTTCTGTTACCGATGATGCATCTCCATCGGAGAAGAAGAAGATGAGAATTGGATCGGTGGAGGAAGAGCTTTTTGTGAAATGGAGAAGAGAGTTAGGATTAGATTTTCCGGTGAACGGTAACGATATAGCGGTGGAGGCGTTGGGTGTGTGTTTGAGAACGTGGAAGTTACTTCCGTTGAAGGTGGCTGCTGCGACGTCGTTTTGGTTGTGGTTAAGATTTTGTGGGGACGGTTCTTATGCCACGTGTCGGAATCTAATGAAGTTAGAGAAAATATCAGGTGTGCCAGCTAAGCTGATTTTGGCCACACATGTGAAACTCGCACGTGTCTTTACACAACACCTTGAATTGCAAGAAGGATGCGACGAGTGCTAA 711 0.4557 MKCNKACELCNQNASFYCPSDSAFLCRNCDDAVHGANFLVARHIRHIICSKCHGFTGNHISGTTLHHRFRSTCRSCLPENHSDDADSQSSSSFESCVTEPKERKVKRMKSFSSSVTDDASPSEKKKMRIGSVEEELFVKWRRELGLDFPVNGNDIAVEALGVCLRTWKLLPLKVAAATSFWLWLRFCGDGSYATCRNLMKLEKISGVPAKLILATHVKLARVFTQHLELQEGCDEC 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00130 236 Pfam B-box zinc finger 5 35 IPR000315 GO:0008270
Trre7g00130 236 ProSiteProfiles Zinc finger B-box type profile. 2 43 IPR000315 GO:0008270
Trre7g00130 236 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 6 114 - -
Trre7g00130 236 SMART bboxneu5 2 48 IPR000315 GO:0008270
Trre7g00130 236 CDD Bbox1_BBX-like 6 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00130 Trre-Chr7 827818 828528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00130 7 227 C2C2-CO-like Transcription Factor Family AT3G21150 34.389 1.32e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre7g00130 zf-B_box 2.6e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00130 - - gmx:102667703 259.61