Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre7g00130 | ATGAAGTGCAATAAAGCTTGTGAACTTTGCAATCAAAATGCTTCTTTCTATTGTCCTTCCGATTCGGCTTTTCTTTGCCGGAACTGCGACGACGCCGTTCACGGTGCCAACTTCCTCGTCGCTCGCCACATCCGTCACATTATCTGCTCAAAATGCCACGGTTTCACTGGAAATCACATCTCCGGGACTACACTCCACCATAGATTCCGATCAACTTGCCGTTCTTGCTTGCCGGAAAATCATTCCGATGATGCAGATTCTCAATCTTCTTCATCTTTTGAGTCTTGCGTTACGGAACCGAAGGAGAGAAAAGTTAAAAGGATGAAGAGTTTTTCAAGTTCTGTTACCGATGATGCATCTCCATCGGAGAAGAAGAAGATGAGAATTGGATCGGTGGAGGAAGAGCTTTTTGTGAAATGGAGAAGAGAGTTAGGATTAGATTTTCCGGTGAACGGTAACGATATAGCGGTGGAGGCGTTGGGTGTGTGTTTGAGAACGTGGAAGTTACTTCCGTTGAAGGTGGCTGCTGCGACGTCGTTTTGGTTGTGGTTAAGATTTTGTGGGGACGGTTCTTATGCCACGTGTCGGAATCTAATGAAGTTAGAGAAAATATCAGGTGTGCCAGCTAAGCTGATTTTGGCCACACATGTGAAACTCGCACGTGTCTTTACACAACACCTTGAATTGCAAGAAGGATGCGACGAGTGCTAA | 711 | 0.4557 | MKCNKACELCNQNASFYCPSDSAFLCRNCDDAVHGANFLVARHIRHIICSKCHGFTGNHISGTTLHHRFRSTCRSCLPENHSDDADSQSSSSFESCVTEPKERKVKRMKSFSSSVTDDASPSEKKKMRIGSVEEELFVKWRRELGLDFPVNGNDIAVEALGVCLRTWKLLPLKVAAATSFWLWLRFCGDGSYATCRNLMKLEKISGVPAKLILATHVKLARVFTQHLELQEGCDEC | 236 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre7g00130 | 236 | Pfam | B-box zinc finger | 5 | 35 | IPR000315 | GO:0008270 | |
Trre7g00130 | 236 | ProSiteProfiles | Zinc finger B-box type profile. | 2 | 43 | IPR000315 | GO:0008270 | |
Trre7g00130 | 236 | PANTHER | ZINC FINGER PROTEIN CONSTANS-LIKE 10 | 6 | 114 | - | - | |
Trre7g00130 | 236 | SMART | bboxneu5 | 2 | 48 | IPR000315 | GO:0008270 | |
Trre7g00130 | 236 | CDD | Bbox1_BBX-like | 6 | 46 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre7g00130 | Trre-Chr7 | 827818 | 828528 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre7g00130 | 7 | 227 | C2C2-CO-like Transcription Factor Family | AT3G21150 | 34.389 | 1.32e-28 | 106 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Trre7g00130 | zf-B_box | 2.6e-05 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre7g00130 | - | - | gmx:102667703 | 259.61 |