Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00100 ATGTCAGACTCTTCTAGCGACAAAAACAAGACGATTAAAAAGGTTGTTCTTGTGACATCTTTATATCCACAATATGGAAAGAATTTAACGAAGATGTATCGGCATAAATCAACTGTTACAGGGGAAGTAATTGAGGTTTATCAACCAAGTAGTGAAAAGGAACAAAAATTTGGTGATAACAAGCATAATTTGAAGGCTTGGGTTGAAATGTATTTACTAAGTTTATCTGATGTGTTGTTGACTACACATCAATCAACTTTTGGTTATGTTGCTAAGGCTTTGGGAAATTCAATACCATGGATTCTTTATCATCTAATTTATAATGAAAATAAGGAGATTTGTGAACGTGAGTTTACATTAGAGCCTTGTTATCATTATCCTCCTTTACATTATTGTGATGGAAAGATTATTGAAGATGTTGCTTCTTCTTTTCATAATATCAGACATTGTAAGGATTTTTCTTTTGGTTTGAAGCTGGTAAACAATTCTGTTTAG 495 0.3192 MSDSSSDKNKTIKKVVLVTSLYPQYGKNLTKMYRHKSTVTGEVIEVYQPSSEKEQKFGDNKHNLKAWVEMYLLSLSDVLLTTHQSTFGYVAKALGNSIPWILYHLIYNENKEICEREFTLEPCYHYPPLHYCDGKIIEDVASSFHNIRHCKDFSFGLKLVNNSV 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00100 164 Gene3D - 3 116 - -
Trre7g00100 164 PANTHER FUCOSYLTRANSFERASE 2-RELATED 6 161 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre7g00100 164 Pfam Xyloglucan fucosyltransferase 3 132 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00100 Trre-Chr7 669229 669723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00100 1 160 Xyloglucan Fucosyltransferase1 AT2G03220 46.341 1.62e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00100 K13681 - gmx:100818288 208.764