Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00094 ATGGGGATATATCTGAGTTCGCCGAAAACTGAGAAGGCATCTGAAGATGGTGAGAATGACATGCTTCGATTCGGTTTGTCATCAATGCAGGGCTGGCGTGCTACTATGGAAGATGCTCATGCAGCTCATCCGTATTTGGACGAGTCTACGTCTTACTTTGGTGTTTATGACGGCCATGGAGGTAAAGCTGTTTCAAAATTCTGTGCGAAGTTTCTACATCAGCAGGTGCTTAGGCATGAAGCATACGTAGCTGGAGATATAGCCACATCTTTACAGAAATCTTTCCTCAGAATGGATGAGATGATGCGCGGACAAAGAGGATGGAGAGAATTAGCAGTCTTGGGAGATAAAATAGAAAAGTTGTCTGGTATGCTAGAGGGGTTTATATGGTCTCCCAGGAGTAGTGAAGCCAATGAACGTGCTGATGAGTGGGCTTTTGAGGAGGGACCCCATTCTGATTTCAGTGGGCCAAACTCTGGAAGCACAGCGTGTGTGGCTGTCATCCGAGGAAAAAAACTTGTTGTTGCAAATGCTGGTGATTCTAGATGCGTGTTATCAAGGAAAGGCCAGGCACACAACTTGTCTAAAGATCACAAACCTGACCTTGAGCTTGAGAAAGACAGGATTCTGAAAGCTGGTGGTTTCATCCAAGTTGGACGAGTCAATGGAAGTTTGAACTTGGCTAGAGCAATTGGAGATATGGAATTCAAGCAGAACAAGTATTTGCCTGCTGAAAAGCAGGTTGTGACTGCTGATCCGGATGTAACTTCAGTCGAGCTTTGCGATGATGATGAGTTTCTTGTTATAGCTTGTGATGGGATATGGGATTGCATGTCCAGCCAACAGCTCGTGGACTTTATACATGGCCAGTTAAAGACAGAGAATAAACTTTCTGCGGTTTGTGAGAAAGTATTCGATAGGTGCTTGGCACCAACAGCTGGTGGTGAGGGATGTGATAACATGACCATGATCTTGATTCAGTTCAAAAATATTCCGACTTCAGATGCTTCTGTCACAGACCAACCTGAGCCATCTGCTCAACCGAATCCAAACCCTCCGGCTCCAGATACATCTGCTCAATCGTCTGAAGCCGAGCAGAAAGTAGAATCAAAGTGA 1116 0.4525 MGIYLSSPKTEKASEDGENDMLRFGLSSMQGWRATMEDAHAAHPYLDESTSYFGVYDGHGGKAVSKFCAKFLHQQVLRHEAYVAGDIATSLQKSFLRMDEMMRGQRGWRELAVLGDKIEKLSGMLEGFIWSPRSSEANERADEWAFEEGPHSDFSGPNSGSTACVAVIRGKKLVVANAGDSRCVLSRKGQAHNLSKDHKPDLELEKDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKYLPAEKQVVTADPDVTSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHGQLKTENKLSAVCEKVFDRCLAPTAGGEGCDNMTMILIQFKNIPTSDASVTDQPEPSAQPNPNPPAPDTSAQSSEAEQKVESK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00094 371 CDD PP2Cc 23 328 IPR001932 -
Trre7g00094 371 Gene3D - 1 329 IPR036457 -
Trre7g00094 371 PANTHER PROTEIN PHOSPHATASE 2C 16 327 IPR015655 GO:0004722|GO:0006470
Trre7g00094 371 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Trre7g00094 371 SMART PP2C_4 13 326 IPR001932 -
Trre7g00094 371 MobiDBLite consensus disorder prediction 333 371 - -
Trre7g00094 371 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Trre7g00094 371 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Trre7g00094 371 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Trre7g00094 371 Pfam Protein phosphatase 2C 138 313 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00094 Trre-Chr7 628777 634748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00094 1 358 PP2C-type Phosphatase Gene Family AT2G25070 72.423 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00094 K17499 - gmx:100499713 644.425