Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00076 ATGTCTTTGAAGATAGGAACTGAAAATTGGCCAAAATCATCATCAGAAAAAGTTGAAGAACCATTGATAGTGATAAGAAATTATGATGAAGAGAAACACAAAGTGGAAGTAGAGAAATTGGAGAGGCTTTGTGAAGTTGGACAGAGTGGAAAACCTTCTCTTGTTACTGACTTATTGGGTGATCCTATTTGTAGAATTCGTCACTTTCAATTACATGTCATGCTGGTTGCAGAATATGGAGAAGAAGGAGAAATTGTTGGAGTGATAAGGGGTTGTGTGAAAACAGTTGCAAGAGGGAATTCAGATTATGTTAAAATTGCTTACGTTTTAGGACTCAGAGTCTCTCCCAAACACAGGAGATTTGGCATTGGCACAAAATTAGTTGAACATTTAGAAGAGTGGTGCAAGCAACAAGGAGCCAAGTATGCATATATGGCAACTGATTGTACAAATGAGCCATCCATCAATTTGTTCACAAAAAAATGTGGTTACTCAAAATTCAGGACTCTAACCATGCTAGTGCAACCAGTTCATGCTCATTACAAGCCCATCAGCACAAATATTGCCGTTCTTCGCCTACCACCGCGCCTAGCCGGGCTCACATACAACAATGTGTTCACCAATTCAGAATTTTTCCCCAAAGACATGGACTTGATTTTGTCAAATAAACTTAATTTGGGCACTTTCATGGCCATCCCCAAAAAATACCTAAACAAATGTGATCCAAAAAATGGTATTTTCCCTCCAAGCTATGCATTATTAAGTGTGTGGAACACAAAAGAAGTGTTCAAATTACAAGTTAAAGGAGTGTCACCATTTGTGCATGCATGTTGTGTAGGTACAAGATTATTAGATGGATGTATGCCATGGCTAAGGTTACCTTCATTTCCTAATGTTTTTAGGCCATTTGGAATTTATCTAATGTATGGATTACACATGGAGGGTAAATTTGGAAAACAACTTATGAAGTCATTATGTGGATTTGTGCATAATATGGCTAGAGATGATGGTGGTTGTGGGGCTATTGTGGCAGAAGTTAGTCAAAGGGACCCAGTTAGAGAAGCAATACCACATTGGAGCAAATTTTCTTGGGCTGAGGACATGTGGTGCATTAAGAATCTTGAGGGTATGAAGAAGGAAATTTTCCAAGAAAAATGTGGACTTTCTAATTGGTTGAGTTATAGATCATCTTCATCAGTAATTTTTGTTGATCCTCGTGATTTTTGA 1227 0.379 MSLKIGTENWPKSSSEKVEEPLIVIRNYDEEKHKVEVEKLERLCEVGQSGKPSLVTDLLGDPICRIRHFQLHVMLVAEYGEEGEIVGVIRGCVKTVARGNSDYVKIAYVLGLRVSPKHRRFGIGTKLVEHLEEWCKQQGAKYAYMATDCTNEPSINLFTKKCGYSKFRTLTMLVQPVHAHYKPISTNIAVLRLPPRLAGLTYNNVFTNSEFFPKDMDLILSNKLNLGTFMAIPKKYLNKCDPKNGIFPPSYALLSVWNTKEVFKLQVKGVSPFVHACCVGTRLLDGCMPWLRLPSFPNVFRPFGIYLMYGLHMEGKFGKQLMKSLCGFVHNMARDDGGCGAIVAEVSQRDPVREAIPHWSKFSWAEDMWCIKNLEGMKKEIFQEKCGLSNWLSYRSSSSVIFVDPRDF 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00076 408 Gene3D - 20 169 - -
Trre7g00076 408 CDD NAT_SF 74 144 - -
Trre7g00076 408 FunFam Putative N-acetyltransferase HLS1 38 169 - -
Trre7g00076 408 Pfam Acetyltransferase (GNAT) family 74 164 IPR000182 GO:0016747
Trre7g00076 408 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 19 408 - -
Trre7g00076 408 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 194 IPR000182 GO:0016747
Trre7g00076 408 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 66 170 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00076 Trre-Chr7 528953 531621 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre7g00076 Acetyltransf_1 3.9e-19 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00076 - - tpra:123923406 790.415