Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00070 ATGCTTTGTTCCATCTTTAGCCGCCGTTTTTGCTCTGTTACAGTTCGTGGTGGTTCAGAACCCAGCTTCTGCAGTTGTTCTGCTGCCGTCATTCTGATCTGTTATGCCTTGGCGTTCGTGTTGTGGTGGTTTGGTGTTTTTCGGCTCCAGATTAAAAAGCCACCTCGTTCATATCTCTGCCTCTTCTTACCCTTTGCTCGTGTTTTCGTAATCGCGCTTTCTCGAACAATCTCATCCTCACAGTTTCGTATTCTTCCCGATCTCACCACTGTATTTTTTTTTAGTAGAAGAGAGAAAAAGAAGAAGAAGAAAAAATCACGTTTGGTTGGTGCAACAAGAGGCCATGCACTTCTGAAGAAGAAAAGTGATGCCTTAACTGTTCAGTTTCGTCAGATCCTGAAAAAGATTGTTTCAACAAAGGAATCAATGGGTGATATCATGAAAACATCTTCATTTGCTTTAACCGAGGCTAAGTATGTAGCTGGTGATAACATCAAGCATGTCGTGCTTGAGAATGTTAAGGAAGCTTCACTCAGAGTGCGTTCTCGTACTGAGAACGTAGCTGGAGTGAAGCTTCCAAAATTTGAGTACTCTGCTGACAGTGAGGCCTCAAAGAATGACCTTACCGGGTTGGCTAGAGGTGGTCAGCAGGTGCAGCAGTGTCGCGTTGCTTATATTAAGGCAATTGAGGTTCTTGTTGAGCTTGCTTCGCTTCAGACCTCTTTCCTTACCCTTGATGATGCTATTAAGACTACTAACCGTAGGGTTAATGCTCTTGAGAATGTTGTTAAGCCACGGTTGGAGAATACTATTAGTTACATTAAGGGTGAGTTGGATGAGCTCGAGAGAGAGGATTTCTTTAGGTTGAAGAAGATTCAGGGTTATAAGAGGAGGGAAATTGAAAGGAAGATGGTGCTTGCTAGGGAACAACAGGCTCTTGAAAAGTTACAATTGCTGAAAGGGGTTTCGTATGAGTCCTCAAACTTGTTGGCTGGTACAACTGGTAAAGACGAGGATATCCTTTTCTAA 1029 0.4305 MLCSIFSRRFCSVTVRGGSEPSFCSCSAAVILICYALAFVLWWFGVFRLQIKKPPRSYLCLFLPFARVFVIALSRTISSSQFRILPDLTTVFFFSRREKKKKKKKSRLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVKEASLRVRSRTENVAGVKLPKFEYSADSEASKNDLTGLARGGQQVQQCRVAYIKAIEVLVELASLQTSFLTLDDAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKRREIERKMVLAREQQALEKLQLLKGVSYESSNLLAGTTGKDEDILF 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00070 342 Coils Coil 264 284 - -
Trre7g00070 342 NCBIfam V-type ATP synthase subunit D 102 296 IPR002699 GO:0046961
Trre7g00070 342 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 104 342 IPR002699 GO:0046961
Trre7g00070 342 Gene3D - 95 304 - -
Trre7g00070 342 FunFam V-type proton ATPase subunit D 101 283 - -
Trre7g00070 342 Pfam ATP synthase subunit D 104 293 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00070 Trre-Chr7 496930 502173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00070 105 342 Primary Pumps ATPases(2) AT3G58730 77.273 8.53e-133 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00070 K02149 - gmx:100801612 389.808