Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00068 ATGGATCAACAAAACAAACAAAGTTTCCAAAACCCAAAGCACATAATTTTCAACAAATATGAAATGGGAAAAGTCTTGGGTCAAGGAAACTTTGCAAAGGTTTACCATTGTAGAAGCCTTTCAACAAACGAGAGTGTAGCCACCAAGGTGATAAAGAAAGAGAAGCTAAAAAAAGAAAGATTAGTGAAGCAAATCAAGCGTGAAGTTTCGGTTATGCGTCTTGTTCGCCATCCTCATATTGTTGATCTCAAAGAAGTTATGGCAACAAAAGGAAAAATATTTCTAGTAATGGAATATGTAAAAGGAGGTGAACTCTTCGCTAAAGTTGCAAAAGGAAAATTGAAAGAAGATGTTGCTAGAAAGTACTTTCAACAGCTCATTAGCGCGGTTGATTTTTGTCATAGTCGTGGTGTTACACACCGTGATTTGAAACCAGAGAATCTTCTCTTAGACGAAAACGAAGACCTGAAAGTCTCCGATTTTGGACTCTCGGCGTTGCCAGAGCAACGCCGAGAGGATGGTATGCTTTTAACTCCATGTGGGACCCCTGCTTATGTGGCACCCGAGGTTTTGAAGAAGAAAGGGTATGATGGTTCTAAGGCTGATATATGGTCTTGTGGAGTTATCCTCTATGCCTTGATTTGTGGATATCTTCCTTTTCAAGGAGAGAATGTTATAAGGATTTATAGAAAGGCTTTTAAAGGCGAATATGAGTTACCTGAATGGATTTCACCACAAGCTAAAATATTAATTTCGAATCTTCTTGTTGCGGATCCTAAAAAGAGGTATTCAATTGTTGATATTATGAATGATCCTTGGTTTCGAATTGGTTTTGTTAGACCCATTGCATTTTCCATGAATGATTCGAGTATTGAAGATAATGACAAAGACATCAATATTGATTTCAATGAGGTTGGTGAAGATTATGTTGATGTTCCTGAATTGATAATGGTGAAACCATCTCGTCCTTTTTATAATGCATTTGAGATAATTTCATCGTTGTCACATGGTTTTGATCTTACAAATTTATTTGAGACGAGGAAAAAGTTGCCATCAATGTTTATATCGAAGTTTTCAGCTTCAACGGTGTTGGAGAAACTTGAGATGATGGCGAAGAAGTTGAACTTTAGGATGACAGGGAAGAAGGAGTTTGTGGTGAGATTCGAGGGGACAAAGGATGGAAGAAAGGGGAAGGTGGCGATGATGATGGAGGTGTTTGGGGTGGCGCCAGAGGTGGCGGTGGTCGAGTTTTCTAAGTGTGGTGGAGACACATTGGAGTATGTTAAGTTGTGTGATGAACAGCTAAGACCTTCACTCAAAGATATTGTTTGGAGTTGGCAAGGTGACAATCATAATGATAACAACCCTCAATAG 1374 0.3879 MDQQNKQSFQNPKHIIFNKYEMGKVLGQGNFAKVYHCRSLSTNESVATKVIKKEKLKKERLVKQIKREVSVMRLVRHPHIVDLKEVMATKGKIFLVMEYVKGGELFAKVAKGKLKEDVARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPEQRREDGMLLTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALICGYLPFQGENVIRIYRKAFKGEYELPEWISPQAKILISNLLVADPKKRYSIVDIMNDPWFRIGFVRPIAFSMNDSSIEDNDKDINIDFNEVGEDYVDVPELIMVKPSRPFYNAFEIISSLSHGFDLTNLFETRKKLPSMFISKFSASTVLEKLEMMAKKLNFRMTGKKEFVVRFEGTKDGRKGKVAMMMEVFGVAPEVAVVEFSKCGGDTLEYVKLCDEQLRPSLKDIVWSWQGDNHNDNNPQ 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00068 457 Gene3D Transferase(Phosphotransferase) domain 1 11 322 - -
Trre7g00068 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Trre7g00068 457 FunFam Aurora kinase A 12 103 - -
Trre7g00068 457 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00068 457 FunFam Non-specific serine/threonine protein kinase 320 444 - -
Trre7g00068 457 ProSitePatterns Protein kinases ATP-binding region signature. 26 53 IPR017441 GO:0005524
Trre7g00068 457 FunFam Non-specific serine/threonine protein kinase 13 312 - -
Trre7g00068 457 SUPERFAMILY Protein kinase-like (PK-like) 16 332 IPR011009 -
Trre7g00068 457 Pfam NAF domain 324 378 IPR004041 GO:0007165
Trre7g00068 457 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00068 457 Gene3D Kinase associated domain 1, KA1 323 445 - -
Trre7g00068 457 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 3 440 - -
Trre7g00068 457 ProSiteProfiles NAF domain profile. 320 345 IPR018451 GO:0007165
Trre7g00068 457 CDD CIPK_C 326 440 - -
Trre7g00068 457 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00068 Trre-Chr7 481450 482823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00068 10 454 CBL-interacting serine-threonine protein kinases AT5G25110 59.775 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Trre7g00068 Pkinase 3e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00068 - - gmx:100812424 704.131