Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00064 ATGCCTGCCCATGATAACATTTCATTAGTCTCCGCCACCGACCAAAGCGTATGTGTCACCGGTGCCGGCGGGTTCATTGCTTCCTGGCTTGTTAAACTTCTCTTGGAGAAAGGCTACACCGTTAGAGGAACCGTCCGAAATCCGGAGGATCCAAAGAATGGTCACTTGAAAGAGTTGGAAGGAGCAAAAGAGAGACTAACTTTGCATAAGGTTGATCTTCTTGATCTTAATTCAATCCAATCTGTTATTCATGGTTGTCATGGTGTATTCCACACAGCTTCCCCTGTCACTGACAATCCTGAGGAGATGTTGGAGCCAGCAGTTAATGGAACCAAGAACGTAATTATTGCGGCCGCGGAAGCGAAAGTGAGGCGTGTCGTATTCACTTCATCGATTGGAACGGTTTATATGAACCCAAATACGAGTAGAGGTGTTGTGATTGATGAGTCGTATTGGAGTGATTTGGAATATTGCAAGAACACCAAGAATTGGTATTGTTATGGGAAGACAGTGGCTGAACAATCAGCATGGGATATAGCAAAAGAAAATCAAGTTGATTTGGTTGTAGTGAACCCAGTTTTGGTTCTTGGACCATTGCTACAATCAACAATTAATGCTAGTACAATGCACATTCTAAAGTATCTTAATGGCTCAACAAAGACTTATGTTAATGCAACACAATCTTATGTTAGTGTTAAGGATGTTGCATTAGCACACCTTCTTGTGTATGAGACAAATTGTGCTTCTGGTAGATACATATGTTCTGATGCTCCCTTGCATCGTGGTGAAGTTGTTGAAATTTTGGCCAAATATTTCCCTGAGTATCCACTTCCTACCAAATGTTCAGATGAAAAGAATCCAAGAGTAAAGCCATATATATTTTCAAATCAAAAGCTGAAAGATTTGGGATTGAAATTCACCCCTGTGAAGCAATGTCTCTATGACACAGTTAGGAGTCTACAACAGAAAGGACATCTTCCTATTTCTCCAATGCAAGAACACTCTGTTTAA 1011 0.4085 MPAHDNISLVSATDQSVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPEDPKNGHLKELEGAKERLTLHKVDLLDLNSIQSVIHGCHGVFHTASPVTDNPEEMLEPAVNGTKNVIIAAAEAKVRRVVFTSSIGTVYMNPNTSRGVVIDESYWSDLEYCKNTKNWYCYGKTVAEQSAWDIAKENQVDLVVVNPVLVLGPLLQSTINASTMHILKYLNGSTKTYVNATQSYVSVKDVALAHLLVYETNCASGRYICSDAPLHRGEVVEILAKYFPEYPLPTKCSDEKNPRVKPYIFSNQKLKDLGLKFTPVKQCLYDTVRSLQQKGHLPISPMQEHSV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00064 336 CDD FR_SDR_e 17 304 - -
Trre7g00064 336 FunFam Cinnamoyl-CoA reductase 1 8 336 - -
Trre7g00064 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 320 IPR036291 -
Trre7g00064 336 Gene3D - 14 336 - -
Trre7g00064 336 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 16 317 - -
Trre7g00064 336 Pfam NAD dependent epimerase/dehydratase family 17 245 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00064 Trre-Chr7 459103 462646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00064 17 280 Monolignol Biosynthesis Gene Families AT1G80820 74.242 9.06e-138 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00064 K09753 - gmx:100811528 559.681