Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre7g00055 | ATGGACAATGAGGATATCCCATCAGTACCTTCTACCCCTGCAACACCAGGTACTCCTGGTGCCCCTCTTTTTGGTGGTTTCAAATCTGAAAGAACAGGAAATGGTTCTGTTGTTAGTAGAAGTAAGTCACTCCTCAAGAATTTGAAATGTTTTAGTGTTGAAGAATGGACTTTGGAAGATGGTGCCTTACCTAAAGTCTCTTGCTCTTTGCCTCCTCCCCCTGTCCCTCTTGCTAAAAAGGTTGGAGCAGAGTTTATAGGCACATTCATTCTAATGTTTGCTGGAATAGGCACTGCAATTGTGAACCAAAAGATACATAACTCAGAGACACTAATTGGATGTGCTGGAGCTAATGGACTTGCTGTTATGATCATAATTTTATCAACTGGTCACATCTCTGGTGCTCATCTCAATCCTGCCGTCACCATTTCCTTTGCCGCATTAAAGCACTTCCCTTGGAAAAATGTGCCTTTGTACATTGGGACACAAGTTCTGGCATCAATATGTGCATCATATACACTGAAAGGGGTTTTTCATCCATTCATGAATGGTGGAGTCACAGTTCCTTCAGTAGAATATGGCCAAGCTTTTGCTTTAGAGTTTATCATCAGCTTTAATCTCATGTTTGTTGTCACTGCTGTGGCCACCGACACAAGAGCTGTGGGTGAGCTTGCGGGAATCGCGGTGGGAGCTACTGTCATGCTCAACATCCTCATGGCTGGGCCTGCAACTGGAGGTTCAATGAATCCAGTAAGAACATTGGGCCCAGCAATTGCTGCAAACAACTACAAAGGCATATGGATATATCTCATAGCCCCTATTATTGGTGCACTAGCTGGGGCAGGTGCCTACACTGCCGTCAAACTCCATGATGAAGAATTTAACTCTGAGGTAAAAGCCTCTTCTGCCCCTGGAAGCTTCAGAAGATGA | 930 | 0.4441 | MDNEDIPSVPSTPATPGTPGAPLFGGFKSERTGNGSVVSRSKSLLKNLKCFSVEEWTLEDGALPKVSCSLPPPPVPLAKKVGAEFIGTFILMFAGIGTAIVNQKIHNSETLIGCAGANGLAVMIIILSTGHISGAHLNPAVTISFAALKHFPWKNVPLYIGTQVLASICASYTLKGVFHPFMNGGVTVPSVEYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILMAGPATGGSMNPVRTLGPAIAANNYKGIWIYLIAPIIGALAGAGAYTAVKLHDEEFNSEVKASSAPGSFRR | 309 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre7g00055 | 309 | ProSitePatterns | MIP family signature. | 136 | 144 | IPR022357 | - | |
Trre7g00055 | 309 | FunFam | Aquaporin NIP2-1 | 67 | 299 | - | - | |
Trre7g00055 | 309 | PANTHER | AQUAPORIN NIP2-1 | 50 | 297 | IPR034294 | - | |
Trre7g00055 | 309 | PRINTS | Major intrinsic protein family signature | 267 | 287 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trre7g00055 | 309 | PRINTS | Major intrinsic protein family signature | 79 | 98 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trre7g00055 | 309 | PRINTS | Major intrinsic protein family signature | 155 | 174 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trre7g00055 | 309 | PRINTS | Major intrinsic protein family signature | 199 | 217 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trre7g00055 | 309 | PRINTS | Major intrinsic protein family signature | 118 | 142 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trre7g00055 | 309 | PRINTS | Major intrinsic protein family signature | 230 | 252 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trre7g00055 | 309 | CDD | MIP | 79 | 284 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trre7g00055 | 309 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Trre7g00055 | 309 | Pfam | Major intrinsic protein | 77 | 284 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trre7g00055 | 309 | SUPERFAMILY | Aquaporin-like | 76 | 296 | IPR023271 | - | |
Trre7g00055 | 309 | Gene3D | Glycerol uptake facilitator protein. | 74 | 301 | IPR023271 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre7g00055 | Trre-Chr7 | 391176 | 394807 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre7g00055 | 1 | 309 | Major Intrinsic Protein MIP | AT1G80760 | 72.669 | 9.90e-158 | 441 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre7g00055 | K09874 | - | gmx:100798410 | 430.254 |