Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00033 ATGAAGGATAAAGATAAAGATAAGGAAAAGGAATCCGAGAAGAAAAAGTATCCTATCGGCGCCGAACATTACATTCTTTACGAAGAGATTGGTCAAGGCGTTAGTGCTTCCGTTTTCCGTGCTCAATGTATTCCTTTCAAGGACATCGTCGCCATCAAGATTCTCGACTTCGAACGTGACAACTGCGATCTGAACAATATATCTCGTGAAGCACAAACAATGGTACTAGTGGACCACCCTAACGTGTTGAAATCACACTGTTCATTCGTTAGCGATCACAATCTATGGGTTGTGATGCCATTCATGTCTGGTGGTTCATGTCTTCACATATTGAAAGCTGCACATCCTGATGGATTTGAAGAGGTTGTTATTGCAACTGTACTTAGGGAGGTATTGAAGGGTTTAGAGTATCTTCATCATCATGGTCACATTCACCGTGACGTTAAAGCTGGTAATATTCTTATCGACTCTCGCGGTGCTGTTAAGCTTGGCGATTTCGGTGTTTCTGCTTGCCTTTTTGATTCCGGTGATCGCCAACGCTCTAGAAATACTTTTGTTGGAACACCTTGTTGGATGGCACCTGAGGTCATGGAGCAATTGCATGGCTATAACTTCAAAGCTGACATCTGGTCATTTGGCATAACTGCTTTGGAGCTTGCCCATGGCCATGCTCCTTTCTCAAAGTATCCACCCTTGAAGGTACTCCTTATGACCTTGCAAAATGCACCCCCAGGCCTTGACTATGAAAGGGACAAGAAGTTCTCTAAGTCTTTTAAGCAGATGATTGCTTGTTGTTTGGTAAAAGATCCTTCAAAAAGACCCTCTGCAAATAGGCTGTTAAAACATTCCTTCTTTAAGCAAGCTCGCTCCAGTGATTATATTACCCGAACTCTATTGGAGGGGCTACCTGCTTTGGGTGATCGCATGGAGATTCTAAAGAGAAAAGAAGAAGATATGCGTGCGCAAAAGAAAATGGCTGATGGGCAGATGGAGGAATTATCACAGAATGAATATAAAAGAGGAATTAGTGGATGGAACTTCAATCTTGAAGATATGAAGGCTCAGGCTTCCTTGATCAACGATTTTGACGATGCTATATCCGATATCAATCATGTGGGAAGTTCAAGTTCCTTATCTAATCTCGATGCGCAAGATAAGCAACAGCCAAATATAGTTCATGTGGGAAGTTCAAGTCACAGCCGTTGTCAAACTGTTGATATGGAGGACAATAATGAAATACATAATCAGTTGGCTTCTGTTCTGGTAGTTGATTCCACAGTAAATGATGCCAAGACTAAAGTTGAAAAATGTGATGATGACTCTAGCATCACCAGCTCAATCCACGAACCACAAACTTCTTCCTGTCATGATGATTATGTGGACCAACGTTTAGGTGAAAAATCTGATGTGGAAAATGGTGTCAGATTGACGGAGGGTGTGGCTATCCATTCTCATCACAGAAGAGGATGTTCATCAAGCATATTGCCGGAAGTTACTCTTCCACCTATTCGAGCAGATTGTGAGAAGCTACAAAATCTTCCCTCAAACGTCTCAAGTTCCAATGCAACTTCAGTTCTACAGACAGGAGAGGATGTGCTTACTGAACTTCCTTCTAGAGTTTCAAAATCATCAGCTAATTCTGATGACACAGATGATAAAGCAAAGGTACCGGTTGTTCAACAGAGAGGACGTTTTAAAGTTACATCTGAGAATGTTGACCCGGAAAAGGTGACCCCTTCTCCTGTACTGCAAAAGAGTCACAGCATGCAGGTTGGTTGTTTAGAGGTTATAAGCCAGCATAATGCTGCTCCTGTACATTCACCTTTACCGTTATTATCAACAATATCTGATTCTGCGCCATCAAATATTTCTGGCTGTTCTCTGTTCCCTGTGTTGCACTCTGTGCTGCAGACAAATATTCTTCAGAGGGATACCATTCTAACTTTAATGAAGCTAATTGGTGCGGGTGACTTTGCAGCTGAGAGCACAAATACCCCAGCACAGATAGCAGCAACAGAGAAATCATTGCTTGAATCAGCTCATGAGAGGGAAAAGGAGTTACTTCATGAGATAACTGATCTGCAATGGAGGCTCATATGCGCCCAGGAAGAGCTTCAAAAATTGAAAACAGATAATGCTCAGGTGTGA 2148 0.4218 MKDKDKDKEKESEKKKYPIGAEHYILYEEIGQGVSASVFRAQCIPFKDIVAIKILDFERDNCDLNNISREAQTMVLVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAHPDGFEEVVIATVLREVLKGLEYLHHHGHIHRDVKAGNILIDSRGAVKLGDFGVSACLFDSGDRQRSRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKYPPLKVLLMTLQNAPPGLDYERDKKFSKSFKQMIACCLVKDPSKRPSANRLLKHSFFKQARSSDYITRTLLEGLPALGDRMEILKRKEEDMRAQKKMADGQMEELSQNEYKRGISGWNFNLEDMKAQASLINDFDDAISDINHVGSSSSLSNLDAQDKQQPNIVHVGSSSHSRCQTVDMEDNNEIHNQLASVLVVDSTVNDAKTKVEKCDDDSSITSSIHEPQTSSCHDDYVDQRLGEKSDVENGVRLTEGVAIHSHHRRGCSSSILPEVTLPPIRADCEKLQNLPSNVSSSNATSVLQTGEDVLTELPSRVSKSSANSDDTDDKAKVPVVQQRGRFKVTSENVDPEKVTPSPVLQKSHSMQVGCLEVISQHNAAPVHSPLPLLSTISDSAPSNISGCSLFPVLHSVLQTNILQRDTILTLMKLIGAGDFAAESTNTPAQIAATEKSLLESAHEREKELLHEITDLQWRLICAQEELQKLKTDNAQV 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00033 715 Coils Coil 312 336 - -
Trre7g00033 715 ProSiteProfiles Protein kinase domain profile. 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00033 715 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Trre7g00033 715 CDD STKc_OSR1_SPAK 22 285 - -
Trre7g00033 715 MobiDBLite consensus disorder prediction 533 555 - -
Trre7g00033 715 FunFam Serine/threonine-protein kinase BLUS1 13 101 - -
Trre7g00033 715 Gene3D Phosphorylase Kinase; domain 1 12 101 - -
Trre7g00033 715 Pfam Protein kinase domain 26 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00033 715 SUPERFAMILY Protein kinase-like (PK-like) 22 286 IPR011009 -
Trre7g00033 715 Coils Coil 691 711 - -
Trre7g00033 715 FunFam serine/threonine-protein kinase BLUS1 isoform X1 105 338 - -
Trre7g00033 715 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 13 710 IPR047173 GO:0043539
Trre7g00033 715 Gene3D Transferase(Phosphotransferase) domain 1 105 339 - -
Trre7g00033 715 SMART serkin_6 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00033 Trre-Chr7 223909 232505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00033 13 697 MAP Kinase Kinase Kinase Kinase AT1G79640 62.734 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Trre7g00033 Pkinase 9.8e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00033 K08835 - gmx:100780339 1155.2