Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00014 ATGAAAGTTGGTGGGATTTCCATATCCACCCCAAAGCTACAAATGCCCATCAATCTCAATAACAGCACTGCTGCATATTATTCATTTCGCAGAACAAAGACAATGACGACACACAAAAAACCATTATTGATAGAAGCTGGAGAATCCTCAGACGGAAGCAGGAAGACTAGCAAGATTCCGAAAGGATACATTGCTGTTTATGTCGGGTTGGAGTTTAGAAGGTTTGTGATTCCAATAAATTTCTTGAGCATGCCTGAGTTGAAGGGTTTGATGGATGATGTGGCTGAGGAGTTTGGTTGTGATTATCATGCTGATGGTGCTCTTCATATTCCATGTGATGAAGATTATTTTCACAATGTTTTGATTAATTGTTTTGCCACACAACGAAGGGTATCTTCTAAGAATTATAAGATTAAACTTGGTAATAAGATTCCCTTAATACACTAG 447 0.3803 MKVGGISISTPKLQMPINLNNSTAAYYSFRRTKTMTTHKKPLLIEAGESSDGSRKTSKIPKGYIAVYVGLEFRRFVIPINFLSMPELKGLMDDVAEEFGCDYHADGALHIPCDEDYFHNVLINCFATQRRVSSKNYKIKLGNKIPLIH 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00014 148 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 52 120 IPR003676 GO:0009733
Trre7g00014 148 Pfam Auxin responsive protein 39 121 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00014 Trre-Chr7 122616 123062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00014 59 125 Calmodulin-binding Proteins AT3G43120 50.746 1.16e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00014 K14488 - psat:127107164 223.787