Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g00007 ATGCACCACAACCACAACCTCCATTGGTTGTGGATTATTGCTTTGGTCTCAACCACCATAGTTCAATGCAAAACATCCTCCCAAGATGTTGCAGCCCTTAATGTGATGTACACCAGCTTGAATTCTCCTTCCCAACTCAGTGACTGGAAATCAAGCGGAGGTGATCCTTGTGGTGATTCCTGGGAAGGAATCAAATGCTCTGGCTCTTCTGTTACGGAAATAGATTTATCTGATTTCGGACTTTCCGGATCAATGGGCTACCAGTTGTCAAGCTTAACATCAGTTACCTACTTTGATTTGAGCAACAACAACCTCAAAGGTCAAATACCGTATCAACTCCCTCCAAATGCTCGTACCATAGATCTTTCTAAGAATGAATTCAGTGGAAGTATACCTTATTCCATTGGTCAGATGAAAGACCTCAACTCTCTAAATCTTGCACATAATCAGCTCAATAACGAGCTGGGAGATATGTTTAAGAGCCTCACTAAACTCAAACAATTGGATGTATCATTCAATTCACTATCAGGAAACCTGCCTCAGAGTCTTAAATCACTCACAAGCCTCAAGAAGATACATCTGCAAAACAATAAATTCTCTGGTTCAATAAATGTCCTTGCCAACCTTCCACTTGATGATGTGAATGTTGAGAACAACAAATTTACTGGTTGGATTCCTGAGGAGTTAAAGGAAATAAATAACTTGCAAACTGGAGGAAACTCTTGGTCAACTGGGCCAGCACCACCTCCTCCTCCCGGTACACCTCATATCAAGCATTCCGAGAAAAATGATGGAAAGTCTGTTGTAACTGGAGTGGTTATAGCCGGTGTAACTTTTGGTGTGCTGGCCGTAATCATAATCATTGTTTCTCTTTCTAAAAGAAGGTCATCTTTACCTTCTTCACGTTTTATTGATGAAGAGAGACGTAGCCAGAACAGATCTTTTACACCGCTTGCATCTCAGGAGTTGTCTAAAGATTCAGGTAATTATGTCTGCACAGAATACAAAGGATTTAAGTCAGTGGGTTCCACTTCAATTGACATAAAGGCTTTACAAAAAAGTTCATCAATTGGTGTTAGGTCATCAGTCTCTGATTGTGTACAAGCCTTTAATGACAATGAGTTTGTAAAGCGTCTAAATTCTAGAAGAAGCACATCAATCCGCTGTACTCCCTTTTCATTGGGAGAGTTGCAAATTGGTACCGCTAACTTTGCTTCAGGTCGACTTCTTGGTGAAGGATCCATTGGACCTGTTTATCGTGCCAAATATGCTGATGGAAAGGTATTCGCTGTAAAAAAAATCAACCCTTCACTTTTAGATGGGGGTTCTCCTGAGGAATTCTCTCAGATTGTAACAAGCATCTGCAAACTTCGTCATCCAAATATTGCTGAGGTTGTTGGTTATTGTTCAGAACAGGAGTACATGTTAATATATGATTATTTCAGAAATGGTTCTCTCCACGAATTTTTACACTTATCAGATGACTTCAGCAAACCACTAACATGGAACACCAGAGTCAGAATTGCACTGGGAACCGCCCGGGCTGTTGAGTACCTACATGAAATTTGTTCTCCACCTTTAGTTCACAAGAATATCAAATCCGCCAATATTTTGCTTGACACAGATTTGAATCCCCGTCTCTCAGACTACGGTTTGGCATCCTTTCACCAGCGTACTAGCCAAAATCTTGGGGCAGGATATAATGCACCAGAATGCACAAAACCATCAGCCTATACCCTGAAGAGCGATGTATACAGTTTTGGTGTGGTGATGCTCGAACTTTTGACAGGTCGAAAGCCTCTGGATAGTTCAAAGCCAAAAGCAGAGCAATGTCTCGTTCGTTGGGCTACCCCGCAGCTTCATGACATTAATGCTGTGGAAAAAATGGTTGACCCTGCCTTGCGAGGACTTTACCCTCCTAAATCGCTCTTCGGATTTGCTGACATCATTGCCCTTTGTGTTCAGTCTGAGCCCGAATTTCGGCCACCTGCATCAGAGGTGGTTCAGGCATTGGTGCGATTAGTTCAGGGTTCAAGTATGAAAATGAGAGAAGATCTTGGCGCTGGTAGGACGGATGATTATGATGATTGA 2091 0.4204 MHHNHNLHWLWIIALVSTTIVQCKTSSQDVAALNVMYTSLNSPSQLSDWKSSGGDPCGDSWEGIKCSGSSVTEIDLSDFGLSGSMGYQLSSLTSVTYFDLSNNNLKGQIPYQLPPNARTIDLSKNEFSGSIPYSIGQMKDLNSLNLAHNQLNNELGDMFKSLTKLKQLDVSFNSLSGNLPQSLKSLTSLKKIHLQNNKFSGSINVLANLPLDDVNVENNKFTGWIPEELKEINNLQTGGNSWSTGPAPPPPPGTPHIKHSEKNDGKSVVTGVVIAGVTFGVLAVIIIIVSLSKRRSSLPSSRFIDEERRSQNRSFTPLASQELSKDSGNYVCTEYKGFKSVGSTSIDIKALQKSSSIGVRSSVSDCVQAFNDNEFVKRLNSRRSTSIRCTPFSLGELQIGTANFASGRLLGEGSIGPVYRAKYADGKVFAVKKINPSLLDGGSPEEFSQIVTSICKLRHPNIAEVVGYCSEQEYMLIYDYFRNGSLHEFLHLSDDFSKPLTWNTRVRIALGTARAVEYLHEICSPPLVHKNIKSANILLDTDLNPRLSDYGLASFHQRTSQNLGAGYNAPECTKPSAYTLKSDVYSFGVVMLELLTGRKPLDSSKPKAEQCLVRWATPQLHDINAVEKMVDPALRGLYPPKSLFGFADIIALCVQSEPEFRPPASEVVQALVRLVQGSSMKMREDLGAGRTDDYDD 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g00007 696 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 675 IPR046959 -
Trre7g00007 696 SUPERFAMILY L domain-like 25 236 - -
Trre7g00007 696 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 369 480 - -
Trre7g00007 696 Gene3D Phosphorylase Kinase; domain 1 364 480 - -
Trre7g00007 696 MobiDBLite consensus disorder prediction 235 263 - -
Trre7g00007 696 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 481 685 - -
Trre7g00007 696 Gene3D Transferase(Phosphotransferase) domain 1 481 689 - -
Trre7g00007 696 MobiDBLite consensus disorder prediction 300 319 - -
Trre7g00007 696 SUPERFAMILY Protein kinase-like (PK-like) 382 671 IPR011009 -
Trre7g00007 696 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Trre7g00007 696 Gene3D Ribonuclease Inhibitor 23 254 IPR032675 -
Trre7g00007 696 ProSiteProfiles Protein kinase domain profile. 404 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g00007 696 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 26 253 - -
Trre7g00007 696 Pfam Protein tyrosine and serine/threonine kinase 407 671 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g00007 Trre-Chr7 67600 75804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g00007 10 695 Strubbelig Receptor Gene Family AT1G78980 62.518 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Trre7g00007 PK_Tyr_Ser-Thr 1.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g00007 - - psat:127107173 1163.67