Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g06132 ATGGTGCTGATTATTCATCATGTATATCCTCTTTCGGCACTCAAGTTGATTTTGTTGATTACTACTCTCTTCACTTTATCAGATTGCTATGACCCTTTGGATCCAAATGGGAACATTTCTATAACTTTTGACATTAACAACCGTGTAGACAACAATGGATATATGGCAAGGGTGACTCTTGAAAACTATCATCAATATCGGCATGTAGACAAACCAGGGTGGAAACTAGGATGGACATGGGCTAACAATGAGGTGATATGGTCAATGAGTGGTGCCATTGTAACTGATAGAGGTGATTGTTCATCTTACGGTTCTCAGATGCCACATTCATGCAAGAAAGATCCAATCATAGTTGATATAGCTCAAGATGTTACACAAAACAGGTCAGACGGTTGTTGTCGCGGTGGCCGCCTCTCTGCACGTGCCGTTGATTATTTCAATTCATTCTCTTCATTTGAATTTGAAGTAAGAAATGCGGGGGGAAAGGAAAATTCACTCGGACAAGCACCTAATAATGTTACATTTATGGCACCTGGTCCTGGTTACACTTGTAGCCCTTTTATGCTTACTGATCCCTCAGTGTCCTTAGATTTAGGAGGACAAAGACAAGTTCCAGTTGCAAAAACTTGGAAGTCAACATGTACATACTCCAGTTTCTTGGCAAACAAGTCACCAGTATGCTGCGTTTCCCTCTCAACATTTTACAATCCTATCATCACACCATGCCGTAATTGCACTTGTGGTGGATGCAGGGAAGCAGATAAAAATACACTCTCTTGCATAAGGCCAGGTGATCCTTTGGGAGGGTCGAATGATGAAAACAACATAATTGAATGCACTGACCATATGTGTCCGATTCGAGTCCATTGGCATATCAAGAACAATTATATGAATCAGTGGAGAGTGAAGCTTACAATTTCTAACTACAACTTCAATAGAAACTACTCTAACTGGAATGTGCTGATTCAACATCCTGGTTTCAACAAAAAAGCAACAACTTACAGCTTCAATAGCACTAAACTTTCGACTCTTGGGATCCAAGATGATGGAGTTGCTCTATTTTGGGGGATAGATTATTACAACAGTGAATTATTGCATTCTGATAAGGATAGAGTTGGTTCAGTGACAACAGAAGTACTAATGGAAAAAGATCCAAGTTCCTTCACATTGCAAAACGGATGGGCATTCCCAAGAAGAATTTATTTCAACGGCGAAAACTGCGACATGCCTTTACCTGACACATTTCCTATGTTACCAAATGGTAGCTCCAGTTTAAGGCCTAATTGTCTTACTTTCAATCTTTCATTAATTTGTTTATTATTACTTATCCTATTAGTACTCAAGTTGTAA 1350 0.3933 MVLIIHHVYPLSALKLILLITTLFTLSDCYDPLDPNGNISITFDINNRVDNNGYMARVTLENYHQYRHVDKPGWKLGWTWANNEVIWSMSGAIVTDRGDCSSYGSQMPHSCKKDPIIVDIAQDVTQNRSDGCCRGGRLSARAVDYFNSFSSFEFEVRNAGGKENSLGQAPNNVTFMAPGPGYTCSPFMLTDPSVSLDLGGQRQVPVAKTWKSTCTYSSFLANKSPVCCVSLSTFYNPIITPCRNCTCGGCREADKNTLSCIRPGDPLGGSNDENNIIECTDHMCPIRVHWHIKNNYMNQWRVKLTISNYNFNRNYSNWNVLIQHPGFNKKATTYSFNSTKLSTLGIQDDGVALFWGIDYYNSELLHSDKDRVGSVTTEVLMEKDPSSFTLQNGWAFPRRIYFNGENCDMPLPDTFPMLPNGSSSLRPNCLTFNLSLICLLLLILLVLKL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g06132 449 PIRSF COBRA 1 448 IPR006918 GO:0010215|GO:0016020
Trre6g06132 449 PANTHER PROTEIN COBRA 18 430 IPR006918 GO:0010215|GO:0016020
Trre6g06132 449 Pfam COBRA-like protein 54 217 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g06132 Trre-Chr6 61096129 61098370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g06132 28 447 COBRA Gene Family AT3G29810 46.714 1.82e-135 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g06132 - - ccaj:109801855 664.455