Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g06125 ATGGCAGCAACGAATCTCTCTACCCTCTCCAACCCTAAACTCTCGTTTTCTTCTTCTACACCTTTCAAATATTCAACCACAAACCCTTGTTTTTTCCCCAACAAAACTCTTCTCAATAACTCAAACCACAATACAATAACACTTTCTCACTCCCACAACTACAAAACACTAACTCCATGCAACAACAACAACAACCTTAATATTGATGATGACGACGACGAAAAGCCTCGTGAAGAATGCGGCGTTGTTGGTATCTACGGCGATCCAGAAGCTTCTCGTCTCTGTTATATCGCTCTCCACGCTCTTCAACACCGTGGTCAAGAAGGTGCTGGTATTGTAACCGTCAACAATAACGTCCTTCAAACCATTACCGGCGTTGGTCTGGTTTCCGAAGTTTTCAACGACGCCAAACTCCGTCAATTACCGGGAACCTTAGCCATCGGTCATGTCCGTTACTCAACCGCAGGACAATCTATGCTCAAAAACGTTCAACCGTTTGTTGCAGGTTACCGGTTCGGTTCAGTTGGTGTTGCTCATAATGGAAATTTCGTCAATTACCGTTCGTTAAGAAATGAACTTGAAGAATCTGGTTCAATTTTCAACACTACTTCTGATACTGAAGTTTTACTTCATCTTATTGCAATTTCAACTCATAGACCTTTTATAGCTAGAGTTGTTGATGCTTGTGAAAAGGTTAAAGGTGCTTTTTCAATTGTGTTTGTTACTGAAGATAAACTTGTTGCTGTTAGAGATCCTTTCGGTTTTCGACCTTTGGTTATGGGAAGAAGAAGTAATGGTGCTATTGTTTTTGCTTCTGAAACATGTGCTCTTGATTTGATTGAAGCTACTTATGAGAGAGAGATTTATCCCGGTGAAGTCGTGGTTGTGGATGAAAATGGTGTTCAATCCCATTGTCTTGTTTCTCATCCAGAACCAAAACAATGTATTTTTGAACATATTTATTTTTCACTGCCAAATTCTGTTGTGTTTGGGAAATCTGTTTATGAATCAAGAAGATTGTTTGGTGAAATATTGGCTAGTGAGAGTCCTGTTGATTGTGATGTTGTTATAGCTGTTCCTGATTCTGGTGTTGTAGCTGCACTTGGTTATGCTGCAAAAGCTGGTGTTCCTTTTCAACAAGGGTTGATTAGGTCACACTATGTTGGTAGAACATTCATTGAGCCATCACAGAAGATTAGAGATTTTGGTGTGAAGTTGAAACTTTCGCCGGTTCGCGCTGTTCTTGAAGGGAAAAGGGTTGTGGTTGTTGATGATTCAATTGTGAGGGGAACAACATCATCTAAAATTGTGAGGCTGTTAAAAGAAGCTGGTGCCAAAGAAGTTCATATGAGGATAGCATGTCCACCAATTATTGGATCTTGTTATTATGGTGTGGATACACCTAGCGCTGGTGAGTTGATATCTAATAGGATGAGTGTGGATGAGATTAAAGAGTTTATTGGTTGTGATTCACTTGCTTTTCTACCTCTTGATAGTTTGAAGAAATTGTTGGCTGATGATTCTTCTAATTTCTGTTATGCTTGTTTCACTGGGAAATATCCTGTTGAACCTGATGAACTTAAATAA 1587 0.3957 MAATNLSTLSNPKLSFSSSTPFKYSTTNPCFFPNKTLLNNSNHNTITLSHSHNYKTLTPCNNNNNLNIDDDDDEKPREECGVVGIYGDPEASRLCYIALHALQHRGQEGAGIVTVNNNVLQTITGVGLVSEVFNDAKLRQLPGTLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNFVNYRSLRNELEESGSIFNTTSDTEVLLHLIAISTHRPFIARVVDACEKVKGAFSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAIVFASETCALDLIEATYEREIYPGEVVVVDENGVQSHCLVSHPEPKQCIFEHIYFSLPNSVVFGKSVYESRRLFGEILASESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIACPPIIGSCYYGVDTPSAGELISNRMSVDEIKEFIGCDSLAFLPLDSLKKLLADDSSNFCYACFTGKYPVEPDELK 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g06125 528 PIRSF Pur1 76 527 IPR005854 GO:0004044|GO:0009113
Trre6g06125 528 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 78 526 - -
Trre6g06125 528 Pfam Glutamine amidotransferase domain 158 277 IPR017932 -
Trre6g06125 528 CDD PRTases_typeI 337 453 IPR000836 -
Trre6g06125 528 Gene3D - 339 503 IPR029057 -
Trre6g06125 528 SUPERFAMILY PRTase-like 315 524 IPR029057 -
Trre6g06125 528 CDD GPATase_N 80 330 IPR035584 -
Trre6g06125 528 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 80 521 IPR029055 -
Trre6g06125 528 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 80 303 IPR029055 -
Trre6g06125 528 Hamap Amidophosphoribosyltransferase [purF]. 79 520 IPR005854 GO:0004044|GO:0009113
Trre6g06125 528 Pfam Phosphoribosyl transferase domain 338 450 IPR000836 -
Trre6g06125 528 NCBIfam amidophosphoribosyltransferase 80 521 IPR005854 GO:0004044|GO:0009113
Trre6g06125 528 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 80 299 IPR017932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g06125 Trre-Chr6 61019073 61020659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g06125 69 528 PRT Gene Family AT4G34740 84.599 0.0 807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g06125 K00764 - gmx:100791919 814.298