Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g06087 ATGGGACTTTGTAAAAAAATAATAGTATGCTTGTTGATGATCGTCATCACAATAGGGTGTATTGAGACTGTTGGTAGAGATCCTGTGCTGCATAGGGTTGGAGGTGGAAAGTATACTTGGAAACCAAAAATTAACTTCACACAATGGGCAAGTAATGAGACTTTCTACAAGGATGATTGGCTATATTTTGGTTTTGACAAGCACATTTACAATGTTCTTGAGGTGAACAAAACAAATTATGAGAAATGTATTGACACTGGATACATAAACAACATCACTAGAGGAGGAAGAGATGTTTTCCAGCTTTCAGAAGAGAGGACATATTACTTTATATGTGGTAGAGGCTTTTGCTTTCAAGGAATGAAGGTTGAAATAAATGTTGAACCACTTGAACTACCACTACTACCTCCTCGAACAATTCCGAATAAGGCATGCTCGTCGAGAAAAATGAATTACACTAAATTCGTTATGCTTTTAGTTATTGCTTTGGCGTGGACCTTCGTGTAG 507 0.3708 MGLCKKIIVCLLMIVITIGCIETVGRDPVLHRVGGGKYTWKPKINFTQWASNETFYKDDWLYFGFDKHIYNVLEVNKTNYEKCIDTGYINNITRGGRDVFQLSEERTYYFICGRGFCFQGMKVEINVEPLELPLLPPRTIPNKACSSRKMNYTKFVMLLVIALAWTFV 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g06087 168 Pfam Plastocyanin-like domain 40 121 IPR003245 GO:0009055
Trre6g06087 168 PANTHER BLUE COPPER PROTEIN 30 142 IPR039391 GO:0009055
Trre6g06087 168 SUPERFAMILY Cupredoxins 31 127 IPR008972 -
Trre6g06087 168 FunFam Lamin-like protein 28 130 - -
Trre6g06087 168 Gene3D - 29 131 IPR008972 -
Trre6g06087 168 ProSiteProfiles Phytocyanin domain profile. 29 129 IPR003245 GO:0009055
Trre6g06087 168 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g06087 Trre-Chr6 60766935 60767552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g06087 6 136 Phytocyanin Superfamily AT2G27035 51.908 5.34e-49 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g06087 - - gmx:100789719 223.016