Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g06012 ATGGCGGGAGGAGCAGCTGTAGGAGAAAGATCATTGAAGGAAACACCAACTTGGGCTGTGGCTGTTGTCTGTGCAGTGTTCATCATAATCTCTGTATTAATTGAACATGGAATCCATACACTTGAAAAGTGGTTTCACAAAAAACATAAGAAGGCCATGAGTGAAGCCTTGGAGAAAATCAAAGAAGAATTGATGCTATTAGGATTCATATCCTTGTTACTTACATTTGGTACAAAATATGTTGCAAAGATATGCATCCCTTCGCATTTAGGTAACATCATGCTTCCATGCAAGAAGGCAGAAGCAAAAAAAGAAGATTCAACAGATGATAGGAGAAGGTTACTTTCTTTTGATGACGAGAATATGGTATGGCGTCGAAGTTTAGCTGCTGCAGCTGGTGGTGATGATTATTGCTCAAAAAAAGGTCAAGTGTCTTTAATATCTCAATCCGGGGTGCACCAATTGCATATATTTATATTCGTACTCGCAGTTTTTCACATTTTTTACAGCGTCATGACTATGGTACTAGCTCGAGCAAAAATGAAGAAATGGAAGGCTTGGGAAGCAGAAACATCCTCCATGGAGTACCAATTTACACATGATCCTGCAAGGTTCAGATTTGCGCATCAAACTACTTTTGTTAGGCGTCACTCAGGCTGGACTAGGAAGCCAGGAATACGATGGATTGTGGCATTCTTCAGACAATTTTTTGCATCCGTGAGTAAGGTGGATTACATGACTATGCGACACGGATTTATTAACGCACATTTTGCTCCTGATAGCAAATTTGACTTCCATAAATACATCAAACGATCAATGGAGGACGATTTTAAAGTTGTCGTCGGTATAAGTATTCCTTTATGGGCATTTGCTGTAATCTTTCTGCTTACGAACGTTTACAATTGGTACACACTCACTTGGCTCTCATTAGCGCCGCTAGTGATACTTCTATTAGTTGGGACGAAGCTTGAGCTCATAATCATGGACATGGCCCAAGAAATCCAAGATCGAACTACAATTGTAAGAGGCGTACCCGTGGTTGAGCCCAACAACAAATATTTTTGGTTCAATCGCCCTCAATGGATCATCTTCTTGATTCATTTCACCTTATTCCAGAATGCTTTCCAAATAGCCTATTTCTTGTGGACGTGGTATGAGTTTAAGATCACATCTTGCTTCCATGAGAACTTGCCACTAATAATAACAAGGGTTGTCCTTGGGGTAGGCTTACAAATCCTATGCAGTTACATAACATTTCCTCTCTATGCATTAGTGACACAGATGGGATCACATTGGAAGAGAGGAATATTTGAGGAACAAACAACAAAAGCACTTAAAAAATGGCAAAAAGCAGCTAGAGATAAGAGAAAATTAAGAAATGCAGGTTCAATAGAGATTCCTTCAATGATGAGTGGAGAAACAACACCAAGTCAAGGAACATCACCTATGCATTTACTTCACAAATTCAAACCTAGTAATCAAACAGACACAGATAGTGTTCTATATTCTCCAAGATCATACCAATCTGATCAAACTGATTTTTCAGACACAGAAGGATCTACACATCAATTAAATTTGAATCAAATCATGTCACAACCTGAACATCATCCTACAGGGAATAATCAACAAAATCATAATATTGATTTTTCATTTGATAAGCCTTAA 1665 0.3856 MAGGAAVGERSLKETPTWAVAVVCAVFIIISVLIEHGIHTLEKWFHKKHKKAMSEALEKIKEELMLLGFISLLLTFGTKYVAKICIPSHLGNIMLPCKKAEAKKEDSTDDRRRLLSFDDENMVWRRSLAAAAGGDDYCSKKGQVSLISQSGVHQLHIFIFVLAVFHIFYSVMTMVLARAKMKKWKAWEAETSSMEYQFTHDPARFRFAHQTTFVRRHSGWTRKPGIRWIVAFFRQFFASVSKVDYMTMRHGFINAHFAPDSKFDFHKYIKRSMEDDFKVVVGISIPLWAFAVIFLLTNVYNWYTLTWLSLAPLVILLLVGTKLELIIMDMAQEIQDRTTIVRGVPVVEPNNKYFWFNRPQWIIFLIHFTLFQNAFQIAYFLWTWYEFKITSCFHENLPLIITRVVLGVGLQILCSYITFPLYALVTQMGSHWKRGIFEEQTTKALKKWQKAARDKRKLRNAGSIEIPSMMSGETTPSQGTSPMHLLHKFKPSNQTDTDSVLYSPRSYQSDQTDFSDTEGSTHQLNLNQIMSQPEHHPTGNNQQNHNIDFSFDKP 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g06012 554 PANTHER MLO-LIKE PROTEIN 1 9 520 IPR004326 GO:0006952|GO:0016020
Trre6g06012 554 MobiDBLite consensus disorder prediction 467 548 - -
Trre6g06012 554 Pfam Mlo family 9 489 IPR004326 GO:0006952|GO:0016020
Trre6g06012 554 MobiDBLite consensus disorder prediction 463 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g06012 Trre-Chr6 60232935 60236694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g06012 6 522 MLO family AT2G39200 50.287 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g06012 K08472 - gmx:100810044 908.286