Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05946 ATGAGTGCCCTAAACGAACCTCTTCAATACCCCGCTGCTCGCAGAGACGACTCAATCGTCGACGACTATCACGGCGTCAAAATCGCCGACCCCTATCGATGGCTCGAAGATCCTGATGCTGAAGAAGTGAAAGAGTTTGTAGAGAAACAGCCACAGGACATTCTCTATGTCCAGGATAGTTTGGATGGAAAACCAGAGGTTTTGCTTGACCCCAATAGCTTAAGTGAAGATGGAACTGTATCGTTGAACACATTGTCGGTGAGTGAAGATGCCAAGTACTTGGCTTATGCACTTAGTACCAGTGGTAGCGATTGGACGACTATAAAAGTGAAGCGTATCGAGGATAAGAATGTTGAGCCTGATACTTTATCATGGGTTAAATTTTCCTCCATTAGTTGGACACATGATAACAAAGGTTTCTTTTATAGCCGCTATCCAGCACCCAAAGATGGAGAAGTGGTAGATGCTGGGACTGAGACAAACTCTAACCTTTATCATATGCTCTATTATCATTTTCTGGGTACGGACCAATCGCATGATATTTTGTGTTGGAAAGATCTTGAAAACCCTAAATATTCATTTGGAGGAACTGTTACCGATGATGGGAAGTATCTCCTCCTCTATATTGGAGAAGGGTGTGATCCAGTTAACAAACTTTACTACTGTGACATATCAAATCTTCCCAGCATACTGGAAATTTTTCGTAGTGAAAATTCCCCCCATCCTTTCGTCAAGCTTATTGATAATTTTGATGCAAAGTATGATTACATTGCAAATGATGACACTGTGTTTACATTTTTAACTAATAAAGATGCTCCAAAATATAAACTAGTCCGAGTAGATTTGAAGGAACCAAACACATGGGGTGATATTCTCCAAGAGTCTGAAAAAGATGTACTTGAGTCAGCATGTGCTGTAAATGGTAACCAACTGATTGTAAGTTACTTGAGTGATGTGAAGCATCTTCTACAAGTAAGAGACTTAAAAACAGGTTCCTTGCTGCATCAACTGCCAATTGACATTGGCACAGTTTATGACATTTCTGCACGGCGTGAAGATAAAGTGGTTTTCATTAGCTTTACAAGCTTTCTATCTCCCGGTATTGTCTATCAGTGTAACCTGGAAACAGGGATTCCTGATCTGAAGATATTCCGAGAAATTGCGGTCCCCGGGTTTGATCGCTCTGAGTTTCATGTCAATCAGGTTTTTGTCCCTAGTAAAGATGGTACCAAGATCCCAATTTTCATTGTTGCGAAAAAGGATATTATTTTGGATAGTTCACACCCGTGTCTGTTATATGGATATGGTGGTTTTAACATCAGTATTACACCGTCCTTCAGTGTTAGTCGCATTGTGCTCACAAAACATTTAGGTTTTGTTTACTGCATTGCAAATATTCGTGGTGGTGGAGAATATGGGGAGGAATGGCATAAAGCAGGTTCCCTTGCTAAAAAACAGAATTGCTTTGACGATTTCATTTCTGCAGCCGAATACCTTGTATCTACTGGTTATACCCAACCCAGAAAGTTATGCATCGAAGGTGGAAGCAATGGTGGACTTCTTGTCGGTGCTTGTATAAATCAGAGACCTGATCTCTTTGGTTGCGCATTGGCTCATGTTGGTGTTATGGACATGCTACGGTTCCACAAGTTTACTATAGGTCATGCTTGGACCTCAGATTATGGTTGTGCAGACAAGGAGGAAGAGTTTCATTGGCTAATCAAGTACTCACCATTGCATAATGTCCGGCAACCGTGGGAACAGCATCCTGACAAGTCAATTCAGTACCCAGCAACCATGTTGTTGACAGCAGATCATGATGATCGAGTTGTGTCACTACACTCATTGAAGCTCTTGGCGACCATGCAGTATGTGCTATGTAGTAGCTTGGAGAACAGTCCCCAGACCAACCCTATAATTGGTCGCATTGACTGCAAAGCTGGACATGGAGCGGGTCGTCCAACACAGAAAATGATTGACGAAGCGGCTGATCGGTACAGTTTTATGGCAAAAATGTTGGGAGCTCATTGGATTGAATAG 2040 0.4196 MSALNEPLQYPAARRDDSIVDDYHGVKIADPYRWLEDPDAEEVKEFVEKQPQDILYVQDSLDGKPEVLLDPNSLSEDGTVSLNTLSVSEDAKYLAYALSTSGSDWTTIKVKRIEDKNVEPDTLSWVKFSSISWTHDNKGFFYSRYPAPKDGEVVDAGTETNSNLYHMLYYHFLGTDQSHDILCWKDLENPKYSFGGTVTDDGKYLLLYIGEGCDPVNKLYYCDISNLPSILEIFRSENSPHPFVKLIDNFDAKYDYIANDDTVFTFLTNKDAPKYKLVRVDLKEPNTWGDILQESEKDVLESACAVNGNQLIVSYLSDVKHLLQVRDLKTGSLLHQLPIDIGTVYDISARREDKVVFISFTSFLSPGIVYQCNLETGIPDLKIFREIAVPGFDRSEFHVNQVFVPSKDGTKIPIFIVAKKDIILDSSHPCLLYGYGGFNISITPSFSVSRIVLTKHLGFVYCIANIRGGGEYGEEWHKAGSLAKKQNCFDDFISAAEYLVSTGYTQPRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDYGCADKEEEFHWLIKYSPLHNVRQPWEQHPDKSIQYPATMLLTADHDDRVVSLHSLKLLATMQYVLCSSLENSPQTNPIIGRIDCKAGHGAGRPTQKMIDEAADRYSFMAKMLGAHWIE 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05946 679 Gene3D - 46 384 - -
Trre6g05946 679 Gene3D alpha/beta hydrolase 385 677 IPR029058 -
Trre6g05946 679 FunFam Prolyl endopeptidase 47 388 - -
Trre6g05946 679 SUPERFAMILY Peptidase/esterase 'gauge' domain 7 390 - -
Trre6g05946 679 Pfam Prolyl oligopeptidase family 444 675 IPR001375 GO:0006508|GO:0008236
Trre6g05946 679 ProSitePatterns Prolyl endopeptidase family serine active site. 491 521 IPR002471 GO:0004252|GO:0006508
Trre6g05946 679 PANTHER PROLYL ENDOPEPTIDASE 6 50 - -
Trre6g05946 679 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 48 377 IPR023302 GO:0004252
Trre6g05946 679 SUPERFAMILY alpha/beta-Hydrolases 399 623 IPR029058 -
Trre6g05946 679 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 456 480 IPR002470 GO:0004252|GO:0006508
Trre6g05946 679 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 484 503 IPR002470 GO:0004252|GO:0006508
Trre6g05946 679 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 596 618 IPR002470 GO:0004252|GO:0006508
Trre6g05946 679 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 429 447 IPR002470 GO:0004252|GO:0006508
Trre6g05946 679 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 514 534 IPR002470 GO:0004252|GO:0006508
Trre6g05946 679 FunFam Prolyl endopeptidase 358 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05946 Trre-Chr6 59747093 59753443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05946 424 561 Carbohydrate Esterase AT5G36210 28.571 2.73e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05946 K01322 - gmx:100776544 1199.5