Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05917 ATGAAACTAAATCAACTTTTGTTAATACTATCATTTGAATTTCTCTTCATTTTTCCTGGAGAGTCAAGATCATCCTTAAGTGATCATATCACTCAATCAGAGAATGACAATCAAGTTTATATTGTTTATATGGGAGCTGCTCATTCAACTAATGGTTCCCTTCGCAAAGATCATGAATATATTTTAAACTCAGTCTTAAGAAGGAACAAAAAGGCTTTAGTACACAACTACAAATATGGATTCTCAGGCTTCGCAGCTCATTTATCAAAAGACGAAGCAAACTCAATCGCGCAGCAGCCTGGAGTTGTGTCTGTGTTCCCAAATCCCATTCTGAAACTTCACACAACACGTTCTTGGGATTTTCTAAAGTTGCAAACTCAAGTTAAAATTGATAGCACGTTCTCTGGTTCTTCTTCTTCCTCATCGAACGTCGTAATTGGCTTATTAGATACAGGTATATGGCCAGAATCAGAAAGTTTTTCAGACAATGGAATGGATCCTATTCCATCTGGTTGGAAAGGGACTTGCATGACATCCCAGGACTTCAACACAACCAACTGTAATAGGAAGATAATAGGAGCGTTGATGAGCGGTGTGGTAGACACAGTAAGAGATAACAATGGACATGGAACACACACATCATCGACGGCGGCAGGGAATGTTGTAAGCGGCGGCAGGGAATGTTCGTTTGACGATGCAATTTCTGATGGAGTTGATGTTCTTTCTCTCTCCCTTGGAGGGGATCCGGATCCCAAACCTGACTTGACAACAGATGTGATTGCAATTGGAGCTTTCCATGCTGTGGAGCGCGGCATCCTTGTGGTTTGCTCCGCTGGAAATGATGGACCAGACAAGGGTTTGGTTGTTAACGACGCTCCTTGGATATTAACCGTTGGTGCCACCACAATTGACCGTAGCCTTCAATCCAACGTTGTCTTGGGTAACAACAAAGTTGTCGAGGGTCAAGCTATAAATTTCTCTCCTCTTTCAAAATCTGCCGATTATCCATTGATAACCGGAGAATCTGCGAAAGCAGCTAAGGCTGACTTAGCAGAAGCAAGACAGTGTCATCCAGATTCATTGGATAAGAAAAAAGTCAAAGGAAAAATTGTCATTTGCGATGGCATTAATGATTTTTATGGAACCTTTATAAAAATTGATACAGTGAAAGAGGTTGGTGGAATAGGTCTTGTTCATATCACTGACCAGGAAGGAGCAGTGGTAGATAATTATAAAGACTTCCCAGCAACAGTTGTAAGATCAAAAAATGATGCCACAATCCTCCAATATGTCAATTCCACAAGCAATCCAGTAGCAACAATTCTACCAACAGTTACAGTCATGGATTATAAACCTGCACCTATGGTGGCAATCTTTTCAAGTAGAGGACCTTCAGCACTTACAAAGAATATTATCAAGCCTGATATTGCAGCACCTGGTGTTGCCATTCTTGCAGCATGGACTGGCACACACAATGACGAAGAATATATTCCAAAAGGGGAAAAGTTCTCGCCGTATAACATTATATCAGGAACTTCCATGTCATGTCCCCATGTTTCAGGCCATGCAGCTAGCATTAAATCTAGAAACCCAACTTGGAGTCCCTCTGCAATCAAATCAGCTATCATGACTTCTGCAACTCAAATTAACAATATCAATGCTCCCATTACAACGGATTTAGAGTCGGTTGCCACACCTTATGACTATGGAGCAGGGGAAATAACAATAACTGAATCATTCCAGCCGGGTCTAGTTTATGAAACCACCACCATGGACTATTTGAACTACTTGTGTTACATAGGACTCAACACAACAACAATTAAGATTATCTCCAAAACTGTTCCGAAAAATTTCAGCTGCCCCAAGGACTCTACTCCTGATCATATTTCCAATATCAACTATCCTTCCATAGCAATTTCCGAATTCACCGGCAAAGAAATTGTGAATGTGAGTAGAACTGTTACAAATATCGGTGAAGAGGATGAAACAGTCTACTCTGCTATAGTTGATGCTCCCAATGGGGTGAAAGTGCAGTTAATTCCAGAGAAACTTCAATTCACAAAAAGTAGCAAAACAGTAACCTACCAAGTTATTTTCTCCTCCACTTTAACCTCATTGAAGGAAAATCTTTTTGGATCCATTACTTGGAGTAATGGTGAACATAGGGTTCGAAGTCCTTTTGTATTAACTGTGTAG 2196 0.4048 MKLNQLLLILSFEFLFIFPGESRSSLSDHITQSENDNQVYIVYMGAAHSTNGSLRKDHEYILNSVLRRNKKALVHNYKYGFSGFAAHLSKDEANSIAQQPGVVSVFPNPILKLHTTRSWDFLKLQTQVKIDSTFSGSSSSSSNVVIGLLDTGIWPESESFSDNGMDPIPSGWKGTCMTSQDFNTTNCNRKIIGALMSGVVDTVRDNNGHGTHTSSTAAGNVVSGGRECSFDDAISDGVDVLSLSLGGDPDPKPDLTTDVIAIGAFHAVERGILVVCSAGNDGPDKGLVVNDAPWILTVGATTIDRSLQSNVVLGNNKVVEGQAINFSPLSKSADYPLITGESAKAAKADLAEARQCHPDSLDKKKVKGKIVICDGINDFYGTFIKIDTVKEVGGIGLVHITDQEGAVVDNYKDFPATVVRSKNDATILQYVNSTSNPVATILPTVTVMDYKPAPMVAIFSSRGPSALTKNIIKPDIAAPGVAILAAWTGTHNDEEYIPKGEKFSPYNIISGTSMSCPHVSGHAASIKSRNPTWSPSAIKSAIMTSATQINNINAPITTDLESVATPYDYGAGEITITESFQPGLVYETTTMDYLNYLCYIGLNTTTIKIISKTVPKNFSCPKDSTPDHISNINYPSIAISEFTGKEIVNVSRTVTNIGEEDETVYSAIVDAPNGVKVQLIPEKLQFTKSSKTVTYQVIFSSTLTSLKENLFGSITWSNGEHRVRSPFVLTV 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05917 731 PRINTS Subtilisin serine protease family (S8) signature 510 526 IPR015500 -
Trre6g05917 731 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Trre6g05917 731 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Trre6g05917 731 Pfam Fibronectin type-III domain 631 728 IPR041469 -
Trre6g05917 731 CDD PA_subtilisin_like 310 441 - -
Trre6g05917 731 Gene3D - 304 448 - -
Trre6g05917 731 CDD Peptidases_S8_3 111 547 IPR034197 -
Trre6g05917 731 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 230 728 IPR045051 -
Trre6g05917 731 Pfam Subtilase family 231 572 IPR000209 GO:0006508|GO:0008236
Trre6g05917 731 ProSiteProfiles Serine proteases, subtilase domain profile. 118 580 - -
Trre6g05917 731 SUPERFAMILY Subtilisin-like 35 625 IPR036852 GO:0004252|GO:0006508
Trre6g05917 731 Gene3D Peptidase S8/S53 domain 143 224 IPR036852 GO:0004252|GO:0006508
Trre6g05917 731 Gene3D - 597 731 - -
Trre6g05917 731 Pfam Subtilase family 141 221 IPR000209 GO:0006508|GO:0008236
Trre6g05917 731 Pfam Peptidase inhibitor I9 39 114 IPR010259 -
Trre6g05917 731 ProSitePatterns Serine proteases, subtilase family, serine active site. 511 521 IPR023828 -
Trre6g05917 731 FunFam subtilisin-like protease SBT1.5 304 448 - -
Trre6g05917 731 FunFam Subtilisin-like protease SBT5.3 28 114 - -
Trre6g05917 731 Gene3D Peptidase S8/S53 domain 230 593 IPR036852 GO:0004252|GO:0006508
Trre6g05917 731 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 114 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05917 Trre-Chr6 59537689 59541461 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05917 40 730 Subtilisin-like Serine Gene Family AT1G20150 49.398 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05917 K25898 - gmx:100820194 981.474