Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05912 ATGTGTACCTTAATGTTATGCTTCATATTATTGGGAGTTGCTTCTATCGTGGCAGCAATAGAACTTCCATCAAATGTTACACTTCCAGCGGTGTTTGTGTCTGGAGATTCTATCATGGATACAGGTAACAACAACAATAACATGAAAACATTGGCTAGGTGCAATTTTCCTCCATATGGAAAAGATTTCAAAGGAGGTGTCCCAACTGGTCGCTTTGGCAATGGAAAAGTTCCATCAGACCTTATAGTTGAAATATTGGGCCTTAAGGAACTTCTGCCTGCATATTTGGATCCAAATTTACAACCTAGCGATCTCATCACCGGTGTTTGCTTTGCATCCGGCGGTTCCGGGTATGATCCTCTCACATCGAAACTTGCGGAAGCTATATCGTTGTCCGGTCAAATAGATTTGTTCAAAGAATACTTAGGAAAGCTAAAAGGACTTGTTGGAGAGGATAGAACAAAATTCATCCTAGCTAATAGTGTTTTCCTTGTGGTTCAAGGAAGCAACGACATTTCCAACACTTATTTTTTGTCTCATGCTAGACAACTACAATATGATGTTCCTGCTTACACTGATCTCATGCTCAACTCTGCCTCCAATTTCTTAAAGGAAATATATGAACTGGGTGCACGAAGGATAGGAGTATTTAGTGCTCCACCAATTGGATGTGTGCCATTTCAGAAAACAATTCTTGGAGGAGTGGAAAGAAAATGTGCTGAAAGTTACAACGATGCATCCAAGTTATTTAACACTAAATTGTCAAATGAGCTAGCTTCCCTTAACCACAACTTGCCCAATTCAAGGATGGTTTACCTTGATGTTTACAATCCTCTTCTTGACATCATTGTAAATTATCAAAATTATGGTTATAAAGTTGGAGACAAAGGATGTTGTGGTACAGGTGAAATTGAGGCAGCAGTGTTATGCAACCAATTTGCTCCACCGTGTGAAGATGTTACTGACTACGTTTTCTGGGACAGTTTTCATCCTTCGCAGAGTGTTTACAACAAGCTTGTCGATCCTCTTCTTAAAAAATATATGCACCAATTCTTCTAG 1059 0.3938 MCTLMLCFILLGVASIVAAIELPSNVTLPAVFVSGDSIMDTGNNNNNMKTLARCNFPPYGKDFKGGVPTGRFGNGKVPSDLIVEILGLKELLPAYLDPNLQPSDLITGVCFASGGSGYDPLTSKLAEAISLSGQIDLFKEYLGKLKGLVGEDRTKFILANSVFLVVQGSNDISNTYFLSHARQLQYDVPAYTDLMLNSASNFLKEIYELGARRIGVFSAPPIGCVPFQKTILGGVERKCAESYNDASKLFNTKLSNELASLNHNLPNSRMVYLDVYNPLLDIIVNYQNYGYKVGDKGCCGTGEIEAAVLCNQFAPPCEDVTDYVFWDSFHPSQSVYNKLVDPLLKKYMHQFF 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05912 352 Gene3D SGNH hydrolase 20 348 IPR036514 -
Trre6g05912 352 Pfam GDSL-like Lipase/Acylhydrolase 31 341 IPR001087 GO:0016788
Trre6g05912 352 PANTHER GDSL ESTERASE/LIPASE EXL3 11 342 - -
Trre6g05912 352 FunFam GDSL esterase/lipase APG 20 348 - -
Trre6g05912 352 CDD SGNH_plant_lipase_like 29 347 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05912 Trre-Chr6 59488309 59492155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05912 25 345 Pollen Coat Proteome AT1G75910 40.123 3.24e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05912 - - gmx:100793604 584.334