Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05855 ATGGTTTTTGGGGGAAGATATATTATTATAATGATGGCACTCTTCTCAATTTACACTGGATTGATATACAATGAATTCTTCTCCATTCCATTCGAACTATTTGGACCAACTGCCTATGGATGTCGTGATCCATCGTGCAGAGATTCTACTACAATAGGTTTGATAAAAGTGCGTGACACTTATCCATTTGGTGTGGATCCTAAATGGCATGGTACTCGGAGTGAACTTCCATTTCTTAACTCTTTGAAAATGAAGATGTCAATTTTACTCGGAGTATCCCAAATGAATCTTGGAATCATATTGAGTTATTTTAATGCCAAATACTTTGGAAACAACATAAATATTTGGCACCAATTTGTTCCCCAAATGATATTCTTGAATAGCCTATTTGGCTATCTTTCACTCCTCATAATTGTAAAATGGTGCACTGGATCACAGGCTGACTTGTATCATGTGATGATATACATGTTCTTAAGTCCAACAGATGATTTGGGTGAAAACCAACTCTTTGTTGGTCAAAAGTTCTTTCAAGTTATGTTACTACTTTTGGCACTCATTGCTGTACCATGGATGTTGTTACCAAAACCCTTTCTCTTGAAGAAACAACATGAAAGGCATAAAGGTCAATCTTATTCTCTCCTCTATAGTGGGGAGGATCCTCTTCAATCAGAATCACATAGCATTCACCTTGACCATAAAGAGTTTGATTTCAGCGAGATTTTTGTGCACCAACTTATACATACAATAGAATTTGTGCTCGGAGCAGTGTCTAATACAGCTTCATATCTTCGTTTATGGGCTCTCAGTCTAGCTCATTCGGAGTTATCAAGCGTTTTCTATGATAAAGTTCTTCTTCTCGCTTGGGGGTATAATAACACCATTGTTCTCATTGTTGGAGTCATTGTTTTTATATGTGCAACTGTTGGTGTTTTACTAGTAATGGAAAGTTTAAGTGCTTTCTTACATGCTTTGAGACTTCATTGGGTAGAGTTCCAAAACAAATTTTATGAGGGAGATGGTTACAAGTTCTCCCCATTTTCATTTACATCGCTTACCGACGAGGATGGACTATAG 1074 0.3696 MVFGGRYIIIMMALFSIYTGLIYNEFFSIPFELFGPTAYGCRDPSCRDSTTIGLIKVRDTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVSQMNLGIILSYFNAKYFGNNINIWHQFVPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKFFQVMLLLLALIAVPWMLLPKPFLLKKQHERHKGQSYSLLYSGEDPLQSESHSIHLDHKEFDFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGYNNTIVLIVGVIVFICATVGVLLVMESLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSFTSLTDEDGL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05855 357 PANTHER VACUOLAR PROTON ATPASES 1 354 IPR002490 GO:0033179|GO:0046961|GO:1902600
Trre6g05855 357 Pfam V-type ATPase 116kDa subunit family 1 348 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05855 Trre-Chr6 59092631 59095491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05855 1 355 Primary Pumps ATPases(2) AT2G21410 77.528 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05855 K02154 - gmx:100805813 642.884