Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05852 ATGGCTGATAATTCAGGTGGGAGAATGTGGTGTTCTATACCAGAAAGGTTTCAACTGCATGTGGCCATGTTGGCCCTGCAGTTTGGATATGCTGGTTTCCATGTTGTCTCAAGAGCTGCACTTAACATGGGTGTTAGCAAACTTGTTTTCCCTGTTTACCGCAATATTATTGCTTTTCTTCTCCTCCTTCCTTTTGCTTACTTCTTGGAAAAGAAGGAGAGACCAGCTATTACTTTAAACTTTCTCTTGCAGTTCTTTTGTCTTGCCCTCGTCGGGATTACAGCAAACCAGGGTTTCTACTTGCTTGGGTTGGACAATACATCTCCAACTTTTGCATCAGCAATTCAAAACTCTGTTCCAGCCATTACATTTCTGATGGCAGTCATACTAAGAATAGAACAAGTGAGGTTGAACAGAAAGGATGGAATAGGGAAAGTGGTAGGAACATTGTTCTGTGTTTTAGGGGCATCAGTGATTACACTTTATAAAGGTCCAACAATATACAGTCCAGTTCCACCACTACACAATAACAGTGGCAGTAGCAATAGCAATAGCAATAGCATAGAAGTATTTGAATCAATCTCAGTTTTGGGAGATGCAAAAGGAAAAAACTGGACACTTGGATGTTTGTACCTTATAGGACATTGTTTGTCTTGGTCTGGTTGGCTTGTGTTGCAAGCACCTGTCCTTAAGAAGTATCCGGCTCGTCTCTCTGTCACTTCTTATACATGTTTCTTTGGACTTATTCAATTTCTCATTATTGCTTTGATTGTTGAAAGAGATGCTCAGGCTTGGATTTTTCAATCTGGTGGTGAAGTTTTCACTATTTTGTATGCGGGAGTGGTGGCATCAGGAATTGCATTCGCTGTACAAATATGGTGCATTGACAGAGGAGGTCCTGTTTTTGTTGCGGTGTATCAACCTGTTCAAACTCTTGTTGTTGCTATTATGGCTTCCCTTGCTTTAGGAGAAGAATTCTACTTAGGAGGGATAATTGGAGCAGGATTGATAATTGTGGGGTTGTACCTAGTCTTGTGGGGTAAAAATGAAGAAAAGAAATTTGCAAGGGAGCTGGCAGAAATCACTTCATCCACTCCTGAGAATAGTAATAGCATCATCAGATCCTCAAGCCATCATGCCAAAACATCACTTGCTCAACCACTTCTTCCTTCATCAACGGAAAATGTTTGA 1191 0.4089 MADNSGGRMWCSIPERFQLHVAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIAFLLLLPFAYFLEKKERPAITLNFLLQFFCLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVILRIEQVRLNRKDGIGKVVGTLFCVLGASVITLYKGPTIYSPVPPLHNNSGSSNSNSNSIEVFESISVLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFLIIALIVERDAQAWIFQSGGEVFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASLALGEEFYLGGIIGAGLIIVGLYLVLWGKNEEKKFARELAEITSSTPENSNSIIRSSSHHAKTSLAQPLLPSSTENV 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05852 396 MobiDBLite consensus disorder prediction 366 396 - -
Trre6g05852 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 350 - -
Trre6g05852 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Trre6g05852 396 PANTHER WAT1-RELATED PROTEIN 21 362 IPR030184 GO:0016020|GO:0022857
Trre6g05852 396 Pfam EamA-like transporter family 207 345 IPR000620 GO:0016020
Trre6g05852 396 Pfam EamA-like transporter family 23 160 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05852 Trre-Chr6 59055804 59060086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05852 1 396 Nodulin-like Gene Family AT1G75500 73.367 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05852 - - gmx:100786714 631.713