Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05828 ATGGAACTTCCTGATTGTATTTATCCATGTCAAGCAATAACTAATATTTCACCAAGTGCTCCAACACCAAAACATTCTCTCTATCTTTCTAATCTTGATGACCAAAAGTTTCTTAGATTTTCTATTAAGTATTTGTACATTTTCAAGAAATCAGTGAACTTGGATCATTTGAAGTGTTCTTTGTCTAGAGTTTTAGTGGATTATTATCCTTTAGCTGGGAGGTTGAGGAGTTGTTCCTCTAATTTGGATGATGATAAGAAGCTTGAAGTTGATTGCAATGGTGAAGGTGCTTTGTTTGTTGAAGCTTTCATGGCTATAAGTGCTGATGAATTAATTGAACCTTCTAAGTTGCCCAATAAGTCATGGAGGAAGTTCATGTATAAAGTGGAATCTCAAAGTTTCTTAGATGTTCCTCCTCTTATTGTTCAGTTAACAAGTCTTCGTTGTGGGGGAATGATTCTATGCACCGCAATCAACCATTGCCTATGCGATGGAATCGGCACATCACAATTTCTACACGCATGGGCACAACTCACCAAACAACCTCAACCAAATTTAACTATCCAACCCTACCACTGGCGACACGTGTTGAAGCCACGACACCCTCCCACGGTAAACCTCCATAATCCCGGATACACCAGAACACAGCCAACCCCTCAAGTAAACCTCCTCAAGTTGATACAATCACAACCCTTAGTACCCACATCCTTTATCTTTAATCCTTCACATGTCCTCTACTTAAAGAAACAATGCACCCCTTCGTTAAAATGCACTACATTTGAAGTAGTTGCGGCACACACGTGGCACTCTTGGATTCGATCATTGAATTTATCCTTACCGTCCAATTTAACCGTGAAATTACTTTTCTCTATCAATGTACGCACCATATTGAACCTGCAAAAAGGATATTACGGAAATGGATTTTTATTAGGTTGCGCCGAAAGTACTATAAAGAATTTAGTAGAGAATAATCTACGCCATGGTGTAAAACTAGTCCAAAAGGCAAAATCGACGGTGAATAATGAGGAGTATATAAGATCAACGGTAGATTTGTTGGAGGATAAAATGGTAAAAACGGATGTTTCAACTAGTTTGGTTATATCACAATGGTCAAAATTGGGGTTAGAAGAAGTGGATTTTGGAGAGGGAAAACCGGTTCACATGGGTCCTTTAACAAGTGATGTTTATTGTTTATTTTTACCGGTTATTGGCGGTGATGTTAATGCTGTGAGAGTGGTTGTTTCTGTGCCAGAGAGTATGGTGGAAAGTTTTCAATATTATATGAATCAAAGCTGGGAAAATAAAATTGAAAATGGAGATTATGTTAAGAATGACTAA 1338 0.3797 MELPDCIYPCQAITNISPSAPTPKHSLYLSNLDDQKFLRFSIKYLYIFKKSVNLDHLKCSLSRVLVDYYPLAGRLRSCSSNLDDDKKLEVDCNGEGALFVEAFMAISADELIEPSKLPNKSWRKFMYKVESQSFLDVPPLIVQLTSLRCGGMILCTAINHCLCDGIGTSQFLHAWAQLTKQPQPNLTIQPYHWRHVLKPRHPPTVNLHNPGYTRTQPTPQVNLLKLIQSQPLVPTSFIFNPSHVLYLKKQCTPSLKCTTFEVVAAHTWHSWIRSLNLSLPSNLTVKLLFSINVRTILNLQKGYYGNGFLLGCAESTIKNLVENNLRHGVKLVQKAKSTVNNEEYIRSTVDLLEDKMVKTDVSTSLVISQWSKLGLEEVDFGEGKPVHMGPLTSDVYCLFLPVIGGDVNAVRVVVSVPESMVESFQYYMNQSWENKIENGDYVKND 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05828 445 Pfam Transferase family 15 427 - -
Trre6g05828 445 Gene3D - 10 214 IPR023213 -
Trre6g05828 445 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 16 426 - -
Trre6g05828 445 Gene3D - 225 430 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05828 Trre-Chr6 58897025 58899973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05828 14 390 Monolignol Biosynthesis Gene Families AT5G48930 28.109 2.94e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05828 - - gmx:100810619 657.907