Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g05827 ATGTCAAAATCATCAATGGAACTTCCTGATTGTATTTATCCATGTCAAGCAATAACTAATATTTCACCAAGTGCTCCAACACCAAAACATTCTCTCTATCTTTCTAATCTTGATGACCAAAAGTTTCTTAGATTTTCTATTAAGTATTTGTACATTTTCAAGAAATCAGTGAACTTGGATCATTTGAAGTGTTCTTTGTCTAGAGTTTTAGTGGATTATTATCCTTTAGCTGGGAGGTTGAGGAGTTGTTCCTCTAATTTGGATGATGATAAGAAGCTTGAAGTTGATTGCAATGGTGAAGGTGCTTTGTTTGTTGAAGCTTTCATGGCTATAAGTGCTGATGAATTAATTGAACCTTCTAAGTTGCCCAATAAGTCATGGAGGAAGTTCATGTATAAAGTGGAATCTCAAAGTTTCTTAGATGTTCCTCCTCTTATTGTTCAGTTAACAAGTCTTCGTTGTGGGGGAATGATTCTATGCACCGCAATCAACCATTGCCTATGCGATGGAATCGGCACATCACAATTTCTACACGCATGGGCACAACTCACCAAACAACCTCAACCAAATTTAACTATCCAACCCTACCACTGGCGACACGTGTTGAAGCCACGACACCCTCCCACGGTAAACCTCCATAATCCCGGATACACCAGAACACAGCCAACCCCTCAAGTAAACCTCCTCAAGTTGATACAATCACAACCCTTAGTACCCACATCCTTTATCTTTAATCCTTCACATGTCCTCTACTTAAAGAAACAATGCACCCCTTCGTTAAAATGCACTACATTTGAAGTAGTTGCGGCACACACGTGGCACTCTTGGATTCGATCATTGAATTTATCCTTACCGTCCAATTTAACCGTGAAATTACTTTTCTCTATCAATGTACGCACCATATTGAACCTGCAAAAAGGATATTACGGAAATGGATTTTTATTAGGTTGCGCCGAAAGTACTATAAAGAATTTAGTAGAGAATAATCTACGCCATGGTGTAAAACTAGTCCAAAAGGCAAAATCGACGGTGAATAATGAGGAGTATATAAGATCAACGGTAGATTTGTTGGAGGATAAAATGGTAAAAACGGATGTTTCAACTAGTTTGGTTATATCACAATGGTCAAAATTGGGGTTAGAAGAAGTGGATTTTGGAGAGGGAAAACCGGTTCACATGGGTCCTTTAACAAGTGATGTTTATTGTTTATTTTTACCGGTTATTGGCGGTGATGTTAATGCTGTGAGAGTGGTTGTTTCTGTGCCAGAGAGTATGGTGGAAAGTTTTCAATATTATATGAATCAAAGCTGGGAAAATAAAATTGAAAATGGAGATTATGTTAAGAATGACTAA 1353 0.3784 MSKSSMELPDCIYPCQAITNISPSAPTPKHSLYLSNLDDQKFLRFSIKYLYIFKKSVNLDHLKCSLSRVLVDYYPLAGRLRSCSSNLDDDKKLEVDCNGEGALFVEAFMAISADELIEPSKLPNKSWRKFMYKVESQSFLDVPPLIVQLTSLRCGGMILCTAINHCLCDGIGTSQFLHAWAQLTKQPQPNLTIQPYHWRHVLKPRHPPTVNLHNPGYTRTQPTPQVNLLKLIQSQPLVPTSFIFNPSHVLYLKKQCTPSLKCTTFEVVAAHTWHSWIRSLNLSLPSNLTVKLLFSINVRTILNLQKGYYGNGFLLGCAESTIKNLVENNLRHGVKLVQKAKSTVNNEEYIRSTVDLLEDKMVKTDVSTSLVISQWSKLGLEEVDFGEGKPVHMGPLTSDVYCLFLPVIGGDVNAVRVVVSVPESMVESFQYYMNQSWENKIENGDYVKND 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g05827 450 Pfam Transferase family 20 432 - -
Trre6g05827 450 Gene3D - 15 219 IPR023213 -
Trre6g05827 450 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 431 - -
Trre6g05827 450 Gene3D - 230 435 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g05827 Trre-Chr6 58897025 58899988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g05827 19 395 Monolignol Biosynthesis Gene Families AT5G48930 28.109 3.53e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g05827 - - gmx:100810619 659.448